Camelina sativa (false flax): 109124654
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Entry
109124654 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109124654
09124 Replication and repair
03420 Nucleotide excision repair
109124654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
109124654
03400 DNA repair and recombination proteins [BR:
csat03400
]
109124654
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109124654
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109124654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
109124654
NCBI-ProteinID:
XP_010488959
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All DBs
Position
19:19688617..19690643
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AA seq
319 aa
AA seq
DB search
MDGATYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV
TSRDLYSADPTVTPVDFTVDSAVSDSSESKGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPDIIINEDMMDTLTEEEKIDLIESSPTKVLGIDPVTRQVVVVDPEAYTY
DEEVIKKAEAMGKPGLIEIHPKDDSFVFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgccacttaccaaagattcccaaaggtcaagatccgtgagcttaaagatgac
tacgcaaagttcgagctccgtgaaaccgacgtttcaatggcgaacgctctccgtcgcgtt
atgatctccgaagtacccaccgttgcaattgatctcgtcgaaatcgaggttaactcctct
gttctcaacgacgagttcatcgctcatcgattaggtctcattcctctcaccagcgagcgt
gctatgagcatgcggttctctcgtgattgtgatgcttgtgatggagatggacagtgcgag
ttttgctctgttgaattcaggcttagtgctaagtgtgttactgaccaaaccctagatgtt
actagcagggatctctacagtgctgatcctactgttactcctgttgatttcactgtcgat
tcggctgtctctgattcaagcgagtcaaaggggattatcattgtgaaactgcgcagggga
caagagttaaggcttagggcgatagcgaggaaaggaatcgggaaagatcatgcgaaatgg
tctcctgcagctactgttacgtttatgtatgagcctgacattattatcaatgaagatatg
atggacactttgacagaagaggaaaagatcgacttgattgagagcagcccaacgaaagtt
cttggcattgacccagtcaccagacaggttgtggtggttgatcctgaagcttacacttac
gatgaagaagtgatcaagaaagctgaagccatggggaaaccgggactgattgagatccat
ccaaaagatgatagttttgtattcactgttgaatccacaggtgcagtgaaggcatcacag
ctggtactaaatgccatagacatcctgaagcagaagcttgatgcagtgcgtctctcagat
gacactgtagaagcagatgatcagtttggtgaacttggcgcccatatgcgtggaggatga
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