Camelina sativa (false flax): 109124664
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Entry
109124664 CDS
T05044
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109124664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
109124664
Enzymes [BR:
csat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
109124664
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
109124664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
NPR3
Motif
Other DBs
NCBI-GeneID:
109124664
NCBI-ProteinID:
XP_010516302
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All DBs
Position
6:17581562..17583564
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AA seq
299 aa
AA seq
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MVRPYGIKVNKRKERTEMYDKEEDEEEEQPKFEQKKKAGESSKKAKKANASIAEEDNEEN
EITEEEEEEAATAEDIVGGIPIVLKDRSTDKPGVVFVLEKASLEVAKVGKTYQLLNSDDH
AHFLMKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYVRTEKGVLFEVKPHVRIPR
TFKRFAGIMLQLLQKLSITAVGNREKLLRCIKNPVEIHLPVNSRKIGFSHSSEKLVNMQK
HLTTVCNDTDTVFVVGAMAHGKIDCDYIDDFVSISGYPLSAAYCISRICEALSTNWNII
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccgtatgggattaaagtgaacaagagaaaggagagaacagagatgtatgat
aaggaagaagatgaagaagaggagcaaccaaagtttgagcaaaagaaaaaggcaggtgag
agttcgaagaaggctaagaaagcaaacgcttcaatagcagaggaagataatgaagagaat
gaaataactgaggaagaagaagaagaagcagcaacagcagaggatattgttggagggata
cctattgtccttaaggatcgtagcacggacaagcccggagttgtttttgtgcttgagaag
gcctctcttgaagttgccaaagttggaaagacttaccagctactaaactcggatgatcat
gctcatttcttgatgaaaaataacagaaatccagctgactaccgcccagatatcactcat
caggcccttcttatgattctggatagtccagttaataaggctgggaggttgaaagcagta
tatgttagaacagaaaaaggtgtcctttttgaagttaagccgcatgttcgtataccaaga
accttcaaacgatttgccggaatcatgttgcaattgctacaaaagctgagcattactgca
gttggcaaccgtgagaaacttttacggtgtatcaagaaccctgtcgaaattcatctaccg
gttaactcccgtaaaataggcttctcacacagctctgaaaagctcgtcaatatgcagaaa
cacctaactactgtctgtaatgatacagacacagtttttgtggtcggcgcaatggcacac
gggaaaatagattgtgactatatcgatgattttgtgtcgatttcagggtatccattgagc
gcagcctactgtatctcaaggatctgcgaggcattatcaacaaattggaatattatataa
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