Camelina sativa (false flax): 109124669
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Entry
109124669 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
109124669
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109124669
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Helicases
109124669
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
109124669
NCBI-ProteinID:
XP_010464628
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Position
15:complement(3866316..3869543)
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AA seq
540 aa
AA seq
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MEKSSYFLFGGTNFNKKKFAPDFAKFKNSSKDDDSDKKVSLFEEEEEDTEQQEVEAVVSS
KKRKRRSSNSVPVEGFDVFKSSKKARAVGKQEDEKTKNEILENPKKELNRRMERDALSRK
QYNIHVSGNNIPPPLKSFAELSSRYGCKRFILRNLAELGFKEPTPIQRQAIPVLLSGREC
FACAPTGSGKTFAFICPMLMKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSKFHI
RLLTKPLVKTADFSKLYCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLK
QIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFA
GTEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENVRVGVIHSELPPGEREN
AVDRFRAGETWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAI
TFYTEEDVPFLRNIANTMISSGCEVPSWIMSLKKKKWRKHRPKRDSISTRPKDDKNEQDE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagctcatattttttgtttggtggaacaaacttcaataagaagaagtttgct
ccagattttgctaagtttaagaattcttcgaaggatgatgattccgataagaaagtgagt
ctctttgaggaagaagaagaagacactgaacagcaggaggtggaagctgttgtgtcatct
aagaagaggaaacgaagatcttctaattctgtgccggttgaaggatttgatgtgtttaag
agctcaaagaaggcacgtgctgtaggtaaacaagaagatgaaaaaacaaagaatgagatt
ttggagaatcccaagaaggaacttaaccggagaatggagcgagatgctctgtcgaggaaa
cagtacaacattcatgtttccggtaacaatattccacccccgcttaaaagcttcgcagag
ttgtcatcaaggtatggttgtaaacgattcattttacgcaatttggctgaactaggattt
aaagagcccaccccaatccaaagacaggctattccagttctcctatcgggtcgtgaatgc
tttgcctgtgctccgactgggtcaggaaaaacctttgcttttatttgtcccatgcttatg
aaactcaagcgtccttcaacagatggaataagagcagttatcctctctcctgctcgggaa
ctggctgcccaaacagctagagaaggaaagaaacttattaaaggaagcaagttccacatt
agattgttaacaaaaccccttgtcaaaacagctgatttctcaaagctgtattgtgatgtt
ctcatatcaacgccaatgaggttgaaaagagcaatcaaggctaaaaagattgacttaagc
aaggtcgagtaccttgtccttgatgaatctgataagctgtttgagcagagcttgttaaag
cagatagattgtgtggttaaggcttgttcaaatccttcaatcatacgctcgttgttcagt
gctactttacccgattctgttgaggaacttgcacgttccataatgcatgatgctgttcgt
gtgatcataggccgaaagaacacagcctctgaaaccgtcaagcaaaagctggtttttgct
ggaactgaagaagggaaacttcttgctcttcgtcaaagctttgcagagagcctgaatcca
ccggtactgatctttgtacaaagcaaagaacgagcaaaggaactctacgatgaactgaaa
tgtgaaaacgtcagagtcggggtcatccattctgagctccctccaggagagcgggaaaac
gcggttgatcgtttcagagcgggggaaacatgggttttgattgccactgatgtgatcgct
agaggtatggatttcaaaggcatcaactgcgtgataaactatgatttcccggattcagct
tctgcatacatccacaggattggtcggtctgggagagcgggtaggagcggagaagcgata
actttctacacggaagaagatgtgcctttcctaaggaacatagccaacacaatgatatca
tcgggatgtgaggttccgtcgtggatcatgtctttgaagaagaagaagtggaggaagcat
aggccgaaacgtgattctatatccactcgaccaaaagacgataaaaatgaacaagatgag
taa
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