Camelina sativa (false flax): 109124765
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Entry
109124765 CDS
T05044
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109124765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
109124765
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109124765
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF7295
Motif
Other DBs
NCBI-GeneID:
109124765
NCBI-ProteinID:
XP_010508024
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Position
5:complement(843253..846477)
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AA seq
621 aa
AA seq
DB search
MIEMMNPQRHKFVRFKGDDEYSTNTTTTTRSSVTSVMRTVRRSFEKGSEKIRTFKQPLSF
HSRKINNKENKKKILRVMNPNDTYLQNWNKIFLLLSVIALAFDPLFFYIPVVNPDSFCLY
LDKKLQTIACVFRTFIDAFYLVHMLFQFHTGFITPASRGFGRGELNENSKDIALRYLRSY
FLIDLLSILPIPQVVVLAIVPKVARPSALVAKELLKWVIFCQYVPRIARIYPLFKEVTRT
SGLVTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQRCTHAYLYCS
TTPGEDNRLFLNGSCPLIDPEEIKDLTVFNFGIFADALQSGVVESKDFPKKIFYCFWWGL
RNLSALGQNLKTSAFEGEIIFAIIICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRD
AEQWMSHRMLPDDLKKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCFKLLKE
VPWFQSMDDRLLDALCARLKTVLYTENSYIVREGEPVEDMLFIMRGILISTTTYGGKTGF
FNSVRLVAGDFCGDLLTWALDPLSSHFPISSRTVQAQTEVEGFVLSADDLKFVATQYRRL
HSKQIRHMFRQDFQLKKCMLS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgatagagatgatgaatccccaaagacacaaattcgtaaggtttaagggagatgatgag
tattcgaccaacactactactactactagatcatcagtaacttcagttatgagaactgtt
agacgaagcttcgaaaagggctcagagaaaatcagaacctttaagcagccactgagcttt
cattcaaggaagattaataataaagaaaacaagaagaagatactaagagtgatgaatcca
aacgacacttatcttcaaaactggaacaagatcttcttgcttctctctgttattgcttta
gcctttgatcctctgtttttctatatcccagtcgtaaaccccgacagtttctgtctttac
ctagacaagaaactccagacaatcgcttgcgttttccgcactttcatcgacgctttctat
ttggttcacatgctgtttcagtttcataccggtttcatcactcctgcttctcgtggtttt
ggaagaggagagcttaatgagaattctaaagatatcgccttaagatacctccgctcatac
tttttaatcgatcttctttcgattctacctattccgcaggtagttgttctagctattgtt
ccaaaagtggcacgaccatccgcgctggtagcaaaagagctattgaaatgggtaatattt
tgccaatatgttccgaggatagcacggatctatccgctttttaaagaagtaacaagaact
tctggtttggtaactgaaactgcttgggctggagctgcattaaacctattcctctacatg
ttagctagccatgtttttgggtcgttttggtacttgatttcgatagagagaaaagataga
tgttggcgtgaagcgtgtgctaagatacagagatgcactcatgcatacttatactgttca
acaacaccaggggaagacaataggttgtttttaaacggttcttgtccgttgatcgatcca
gaagagataaaagacttgacggttttcaactttggtatattcgctgatgctttgcagtct
ggagttgtggagtcaaaagatttccccaagaagattttctattgtttctggtggggtctc
cgcaatcttagtgctttgggccaaaacttgaagacgagtgcgtttgaaggtgagatcatt
tttgcgattatcatttgcatctctggactagtcttgtttgctctactcattggaaatatg
cagaaatatttgcaatcaactactgtaagagttgaggaaatgagagtgaaaaggagagat
gcagagcaatggatgtctcatcggatgttgccagacgatctgaaaaaacgtatccgtaaa
tacgaacagtataaatggcaagaaaccaaaggagttgaggaagaagctcttctctctagt
cttccaaaagatctcagaaaagacattaaacgccatctttgtttcaaattgctcaaagag
gtcccttggtttcaatctatggatgatcgattattagacgctctatgtgctcgtctcaaa
acggttctttacacagagaacagttacattgtgcgcgaaggtgaaccagtggaagatatg
ttgtttataatgagaggaattcttataagcacaacaacttatggtggcaaaactggattc
ttcaattcggttcgcttggttgctggtgatttctgtggagatcttctcacttgggcatta
gatcctctcagttcccacttccctatctctagcagaaccgttcaagctcagacagaagtc
gaaggctttgttctctcggctgatgatctcaagtttgtcgctactcagtatcgtcgcctt
catagcaagcaaatccgacacatgttcaggcaagattttcaattgaaaaaatgcatgctg
agttaa
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