Camelina sativa (false flax): 109124766
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Entry
109124766 CDS
T05044
Name
(RefSeq) sm-like protein LSM8 isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109124766
09123 Folding, sorting and degradation
03018 RNA degradation
109124766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
109124766
03041 Spliceosome [BR:
csat03041
]
109124766
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109124766
mRNA degradation factors
5'-3' decay
Lsm complex
109124766
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109124766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
DUF7130
Motif
Other DBs
NCBI-GeneID:
109124766
NCBI-ProteinID:
XP_010415113
UniProt:
A0ABM0SRK3
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Position
7:complement(14486967..14489328)
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AA seq
98 aa
AA seq
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MATATGLESLVDQYISVITNDGRNIVGYLKGFDQATNIILDESHERVFSTKEGVQQHVLG
LFIIRGDNIGVIGELDEELDASLDLSNLRAHPLKPVVH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagctactggactcgagtctcttgttgatcagtatatatcggtgattacaaat
gatggacgcaacattgtgggatatcttaaaggttttgaccaagctacaaatataatcctt
gatgaatctcatgagcgtgtgttttccacaaaggaaggggtacaacagcatgtgttgggt
ttgttcattatcagaggcgacaacataggtgttattggggagctggacgaggagcttgat
gcaagtctggacttatcaaacctgagagctcatcctttgaaacccgtcgtgcattga
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