KEGG   Camelina sativa (false flax): 109124766
Entry
109124766         CDS       T05044                                 
Name
(RefSeq) sm-like protein LSM8 isoform X1
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109124766
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109124766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    109124766
   03041 Spliceosome [BR:csat03041]
    109124766
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109124766
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109124766
Spliceosome [BR:csat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109124766
SSDB
Motif
Pfam: LSM DUF150_C DUF7130
Other DBs
NCBI-GeneID: 109124766
NCBI-ProteinID: XP_010415113
UniProt: A0ABM0SRK3
LinkDB
Position
7:complement(14486967..14489328)
AA seq 98 aa
MATATGLESLVDQYISVITNDGRNIVGYLKGFDQATNIILDESHERVFSTKEGVQQHVLG
LFIIRGDNIGVIGELDEELDASLDLSNLRAHPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcgacagctactggactcgagtctcttgttgatcagtatatatcggtgattacaaat
gatggacgcaacattgtgggatatcttaaaggttttgaccaagctacaaatataatcctt
gatgaatctcatgagcgtgtgttttccacaaaggaaggggtacaacagcatgtgttgggt
ttgttcattatcagaggcgacaacataggtgttattggggagctggacgaggagcttgat
gcaagtctggacttatcaaacctgagagctcatcctttgaaacccgtcgtgcattga

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