Camelina sativa (false flax): 109124798
Help
Entry
109124798 CDS
T05044
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
109124798
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109124798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
TGF_beta
Nup35_RRM_2
DUF3587
Motif
Other DBs
NCBI-GeneID:
109124798
NCBI-ProteinID:
XP_010479003
LinkDB
All DBs
Position
17:complement(23933988..23938801)
Genome browser
AA seq
433 aa
AA seq
DB search
MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQF
FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV
FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL
QVNYNNDRSRDYTNPNLPAEQKGRSSHPGGYGDVGVAYPQMANTAAIAAAFGGGLPPGIT
GTNDRCTLLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAV
HFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHL
STLPQDVTEEEVVNHVQEHGAIVNTKVFEMNGKKQALVQFETEEEAAEALVCKHATSLGG
SITRISFSQLQTI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcttccaaagtcattcatgttcgtaatgttggccatgagatttctgaaaat
gatttgcttcagctttttcaaccatttggggttataactaagcttgtcatgctcagggca
aagaatcaggctcttctccaaatgcaagatgttccttcagcagtcagtgcccttcagttt
tttactaatgtgcagccaactataagaggtaggaatgtgtatgtccagttctcttctcat
caagagttgacaactatagagcagaatattcatggacgggaagacgagccgaatcgtatt
ctcttagtcactatccatcacatgctgtatccaattactgttgacgtgctgcatcaagtt
ttttctccttatggatttgtcgagaagctcgtcactttccagaagtctgctggctttcaa
gctcttatacagtatcaggtacaacagtgtgctgcctctgctagaactgctctacagggt
cgtaacatatatgatgggtgttgtcagttggatatccagttctcaaatcttgaggagctg
caagtaaattacaacaatgatcgatctagggattatacaaacccaaacctgccagcagag
caaaaaggccgatcatcgcatcctggcggctatggtgatgttggagtggcatatcctcag
atggcaaacacagccgcaattgcagctgcctttggaggaggcttgcctccgggtataact
ggcacaaatgataggtgtacattgcttgtctccaatctgaatgcggatagtattgatgag
gataagctattcaatctcttttctctttacgggaacattgtaaggattaagcttcttcgg
aacaaacctgaccacgcccttgtccaaatgggtgatggtttccaagctgaacttgcagta
catttcctcaaaggagcgatgctgtttggtaagcggctagaagtaaacttctcgaagcat
ccaaatataacaccaggcacagactcccatgattatgtaaactcgaacctgaaccgcttc
aaccgcaatgctgcaaagaactaccgctattgctgctcccctacaaagatgattcacctg
tcgacacttcctcaagacgtgacagaggaggaagtggtgaaccatgtgcaagaacacggg
gcaatagtgaacacaaaagtgtttgagatgaacgggaaaaagcaagctctggtacagttt
gagactgaggaggaagctgcggaagcattggtgtgcaagcacgcgacttctctaggcgga
tcaattaccagaatctccttctcccagctacagacgatttaa
DBGET
integrated database retrieval system
