Camelina sativa (false flax): 109128358
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Entry
109128358 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109128358
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109128358
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
End_N_terminal
DUF5441
Motif
Other DBs
NCBI-GeneID:
109128358
NCBI-ProteinID:
XP_019090110
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Position
13:complement(14425216..14427610)
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AA seq
400 aa
AA seq
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MHDSDEIILHLSMLIIFLCFGLVNGQNYNVLDFGAIGDGQTDDSMAFVQAWNATCRGEEN
NNTLVIPSGQTFLLQPIKFNGPCKSTSIKIQLDGVIIAPSNIKAWSNPKSQMWISFSSVF
GLIVDGSGKIDGGGSSFWELNLTASQRPTALHINKCNNLTINGISSINSPKTHLSIKSCN
YVAISKINLLAPETSPNTDGIDIQNSTNINIFDSTIQTGDDCIAIKTGSFNINITQINCG
PGHGISVGSLGADGANDAVSGVQVTHCTFNRTMNGARIKTWEGGQGYARNISFENITLIN
AKNPIIIDQQYIDKGRHNAKEDSAVAISNIKYVGFHGTTLNEDAITLKCSVTTSCKNVVM
DDNNITMENGKTPKVHCENVEGESDGSDLLRDCFKSNNTS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattcggatgaaatcatattacatctatcgatgttgataattttcctatgtttt
ggtcttgtaaatggccaaaattacaacgtacttgattttggtgctataggagacggtcaa
accgatgattcaatggcttttgtacaagcatggaatgctacatgtagaggggaagaaaac
aataatacacttgttattccctctggacaaacatttttactccaacctattaagttcaat
ggcccatgtaaatctacctccatcaaaattcagttggatggtgtcatcattgcacctagc
aacatcaaagcatggtccaaccccaaatctcaaatgtggattagtttttcatcagtattt
ggtctaatagtagatggttcaggaaagatcgatggtggtggttcatccttttgggagctt
aatctcacggcttctcaacgacctacagcattacatattaataaatgtaataatctcact
ataaacggaatttcctcgattaatagtccaaaaacccatttatcaatcaaatcatgcaat
tatgttgcaatatcaaaaataaaccttttggctcctgaaacaagtcccaacacagatgga
attgatatacaaaactcgaccaatatcaacatatttgactctacaattcaaacaggagat
gattgtatagcaatcaaaacaggaagtttcaatatcaacatcacacaaattaattgtgga
cctggtcatggaataagtgtgggaagtttaggagccgatggagcaaatgatgcagttagt
ggtgttcaagtgacacattgtacttttaacagaacgatgaatggagctagaataaagact
tgggagggtggtcagggatatgcaagaaacataagttttgagaacattacgctcataaat
gcaaaaaatccaattataatcgaccaacaatatattgataaaggacgtcataatgcaaaa
gaggattcagccgtggcaattagcaatataaaatatgttggctttcatggaacaacatta
aatgaagatgctataacgctgaagtgtagtgtcaccacatcttgcaaaaacgttgttatg
gatgataataacattacaatggaaaatggaaaaacacctaaagttcattgcgaaaatgtt
gaaggagagtctgatggtagcgatttgttgcgtgactgctttaaaagtaataatacgtct
tag
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