KEGG   Camelina sativa (false flax): 109128607
Entry
109128607         CDS       T05044                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
csat  Camelina sativa (false flax)
Pathway
csat03022  Basal transcription factors
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109128607
  09124 Replication and repair
   03420 Nucleotide excision repair
    109128607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    109128607
   03400 DNA repair and recombination proteins [BR:csat03400]
    109128607
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109128607
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109128607
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 109128607
NCBI-ProteinID: XP_019090853
LinkDB
Position
14:5770362..5771355
AA seq 71 aa
MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQRFIIHVLDSTHLFVQPQVEQMIRSAISDF
RDQNSYEKPTS
NT seq 216 nt   +upstreamnt  +downstreamnt
atggttaatgcaatcaaaggagtgttcgtctcctgtgatatcccgatgacacagttcata
gtgaacatgaacaattcgatgcctccgtctcagagattcataatacatgtacttgatagc
actcacttgtttgtgcagccacaggttgagcagatgattcgcagtgctatttctgatttt
agagatcaaaactcttacgagaagcccacttcttag

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