Camelina sativa (false flax): 109130942
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Entry
109130942 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 45-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109130942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
109130942
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109130942
Spliceosome [BR:
csat03041
]
Complex A
U2 snRNP components
U2 related factors
109130942
Complex B
109130942
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
109130942
NCBI-ProteinID:
XP_019096629
UniProt:
A0ABM1RC91
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All DBs
Position
19:complement(3995609..3996878)
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AA seq
357 aa
AA seq
DB search
MTKYGYACLSLHGGKDQADRESAISDFKSTVCNLLIATSVAARGLDVKELDLVVNFDPPN
HYEDYVHRVGRTGRAGRKGCAVTFLSEDDAKYAPDLVKAMELSEQLVPDDVKAVADGFIM
AKVKQGIEQAHGTGYGGSGFRFNEEEEEIRKAAKKAQAKEYGYEEEKSDSEDENDVVRKA
GSDISQQQAMLSQIAAISAAAEATVTANQLLPNGGGLVTVAGVPPCDGAGRVAAMAAAAN
LQHNLARILQADAMPEHYEPELEINDFPQNARWRVTHKETLGPISEWSGAAITVRGQYYE
SGSMPGPGQRKLYLFVEGPTEISVKTAKTELKRVLEDVTNQAFSLPGGTQARRYSVL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatatggttatgcatgtctatctcttcacgggggtaaggaccaggctgatcgt
gaatcagctatatctgattttaagagcactgtctgcaatttgttgattgccacaagtgtt
gcagccaggggtctagatgtgaaagagcttgacttggttgtaaactttgatccgccgaac
cactatgaagactacgtgcatcgtgttggcaggacaggtagggcagggcggaaaggctgt
gctgtaacttttctctccgaggatgatgcaaaatatgcaccagatttagtcaaggccatg
gaactatctgagcagcttgttcctgatgatgtaaaagcagtggccgatgggttcatcatg
gcaaaagtgaaacagggtattgagcaagctcatggaactggctatggtggcagtggcttt
agattcaatgaagaggaggaggaaatcaggaaagcagcaaagaaagcacaagcgaaggag
tatggctatgaggaagagaagtctgactcagaagatgagaatgatgtagtaagaaaggct
ggtagtgatatctcacagcaacaagctatgctttctcagatagccgccatttctgctgct
gctgaagctactgtgacagctaaccaattgctgcctaatggtggcgggcttgttactgtg
gcaggtgtccctccttgtgatggagcaggccgcgttgcagccatggctgctgccgctaac
ctgcaacacaaccttgcaaggattcttcaagctgatgcgatgcctgaacactatgaacca
gaattggaaatcaatgattttccacaaaatgctcggtggagagtcacccacaaagaaacg
cttggtccaatatcagagtggagtggagccgccattaccgttagaggtcagtattatgag
tcaggaagtatgcccggacctgggcaacgcaagctttatctgttcgttgaagggcctacc
gaaatatctgttaagacagcaaaaactgaactcaagcgtgttcttgaagacgtaactaat
caagccttctctctccctggaggaacacaagccagaagatactctgtcctataa
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