Capilliphycus salinus: ACL6C3_08075
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Entry
ACL6C3_08075 CDS
T10919
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csau Capilliphycus salinus
Pathway
csau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACL6C3_08075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csau03021
]
ACL6C3_08075
03400 DNA repair and recombination proteins [BR:
csau03400
]
ACL6C3_08075
Enzymes [BR:
csau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACL6C3_08075
Transcription machinery [BR:
csau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACL6C3_08075
DNA repair and recombination proteins [BR:
csau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACL6C3_08075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
KH_PARP14_8
HHH_XRCC3_RpoA
DUF6964
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XNO71954
LinkDB
All DBs
Position
1950369..1951316
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFKIECIESNTDTDRSQYGKFVLEPLDRGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VNHEFATISGVREDVLEILLNLKEIVLNSYSNQRQIGRLLVQGPATVTAGHFDLPSEVEV
VDKNQYIATLSPGATLEMEFQIEKGTGYRAVEQRNRDETTPVDFLQIDAVFMPVRKVNYT
VEDARVGGSLEKDRLIMEISTNGSLSPQDALSQAANILVDLFVPLKDITLDIHKPDQSDD
IDPTSQIPIEELQLSVRAYNCLKRAQINSVADLRDYTQEDLLEIKNFGQKSAEEVIEALQ
KRLGITLPQERASKP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaatttaagattgagtgtattgagtcaaacactgatacagaccggagtcaatac
ggtaaatttgtcctggaaccgctcgatcgcggccagggaacaacagttggcaacgcactc
agacgggtactcttgtcaaacctagaaggaacggcggtcacggccgttcggattgctgga
gttaaccatgagtttgccacaatctcaggggtaagagaagatgtattagaaattctgctc
aacttgaaagaaattgttctcaatagctattctaaccaaagacaaatcggtcgtttattg
gttcaagggccggcaacggtaacagcaggtcactttgacctgccctcagaggtcgaagtc
gtagataaaaaccaatatatcgcgaccttatctccaggagcaaccttggagatggaattt
caaatcgaaaaagggacgggctatcgggccgtagaacaacggaatcgcgatgaaacaacc
cctgtggattttttacaaatcgatgcggtgttcatgccggttcgcaaagtcaattacacg
gtagaagatgcgcgggtggggggttcgctggaaaaagatcggttaattatggagatctcg
accaatggcagtctgagtccccaagatgccctgagccaagcggcaaacatcttagtagac
ttgtttgttccgctcaaggatatcacactcgatattcacaaaccggatcagagcgatgat
atcgatccgaccagtcagatccccatcgaagaacttcagctatcggtgcgagcctataac
tgtctcaaacgcgctcaaatcaactcggtggcagacttacgggattatacccaagaagac
ctcttagaaatcaaaaactttggtcaaaagtccgccgaagaggtgatcgaagccttacaa
aaacgcctggggattaccttacctcaggaaagagccagcaaaccctag
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