Capilliphycus salinus: ACL6C3_13980
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Entry
ACL6C3_13980 CDS
T10919
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csau Capilliphycus salinus
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csau03032
]
ACL6C3_13980 (topA)
03400 DNA repair and recombination proteins [BR:
csau03400
]
ACL6C3_13980 (topA)
Enzymes [BR:
csau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACL6C3_13980 (topA)
DNA replication proteins [BR:
csau03032
]
Prokaryotic type
DNA Topoisomerases
ACL6C3_13980 (topA)
DNA repair and recombination proteins [BR:
csau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACL6C3_13980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6475
CpXC
Motif
Other DBs
NCBI-ProteinID:
XNO73074
LinkDB
All DBs
Position
complement(3366176..3368122)
Genome browser
AA seq
648 aa
AA seq
DB search
MSKSLLICESPGKVKKLAEYAGNDYVVIPCYGHVRELSKSGQLGMGFSLNTQKKRVFCDY
VSRHPNSQKVLNRLAQAIKNSSRVVLATDEDREVEFISWHLFDALNLKNLGVEVLRVTFT
EITRKAVQSALDNPRQIDLNLVRAAMARSCLDKLVGFSLSPMLWKTGTGAKSAGRCQSAA
LHLLAERERKISNFKPQDYWLVRSHYVGGWVGKLVDNSHQEIQFSSQQEATNVVEITANI
LHQVVNLEKKEVSKFPPAPFTTSTLQQAAGDKLNLTTKTTMNVAQKLYESGLITYMRTDS
CSLSEEFCVCVKAYLQQHDLQNIPEVVTQHRNNNSAQEGHEAIRPTHIGDTPERLSLSIE
GKELQLYELIWNRSIASQCQPALIKQTLVKIAASDYNFILKGNRIVQLGYAKYWNNLTEE
KTLSEFSVGQDLELENVRSSQHQTEPPKRFTEPSLVKTLEKTGVGRPSTYANIINTLLDR
VYVTLAKKNLMVTELGLKVDELLSKVVPDVIDPGFTAQLEANLDEIAAGQLNWENWLIDW
NSRVFQPALNKGNQVIERVVSEQLTEFTCPICDAKLEKHQYTKNRELKMMLRCSQSRHPD
CQDVTYFQSNGLFWSPKFGELPGQKKPKLSGVKSKSTSKVSRSKRRKR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagtcttttaatttgcgaatctccgggcaaggtcaaaaagcttgcagaatat
gcggggaatgattacgttgtcattccctgttacggtcatgttcgggaactatccaaatcc
ggtcagttggggatgggatttagtttgaatactcaaaaaaagcgggtattttgtgattat
gtttctcgccaccccaacagtcagaaagttttaaatcgattggctcaggcgattaaaaat
agtagtcgggtcgtactggcaacagatgaggatagagaggtagaattcatttcttggcac
ttgtttgatgcgcttaatctcaaaaatctaggcgttgaagttttgcgggtaacgttcacc
gaaattactagaaaagccgttcaaagtgctttggataatccccgacaaattgatctgaat
ttagttcgcgctgcaatggctcgttcctgtctcgataagttggtgggattcagtttatct
ccgatgttgtggaaaaccggaacgggtgcaaaatcggcaggtcgttgtcagagtgcggct
ctccatttgttagcagaaagagaacgaaaaattagcaactttaagcctcaagattactgg
ctagtgcgatcgcattatgtcggtggatgggttggcaaacttgtagacaattctcatcaa
gaaatccagttttcttcccaacaagaggcgactaatgttgtggagataactgctaatatt
ttacatcaagttgttaatcttgagaagaaggaagtgagtaagtttcctcctgcacccttt
acgactagcacgcttcaacaagccgcaggagacaaactgaatttaacgacaaaaacaaca
atgaatgtcgctcagaaactctacgaatctggattgattacttatatgagaacggattct
tgctctttatccgaggagttttgtgtttgcgttaaggcttatttacaacaacatgatttg
cagaatatacccgaagttgtcacccaacatcgcaacaacaactccgcacaagaaggacat
gaagcgattcgacccactcatattggagacactcccgaacgcttaagtttatcaattgag
gggaaagagctacaattatatgagttgatttggaatcggtcaattgcctctcaatgtcaa
cccgctttgataaaacaaaccctggttaaaattgcggcaagtgactataattttattctg
aagggtaatcgtattgtacagttgggctatgcaaagtattggaacaatctaacagaggaa
aaaacgctgtccgaattttcggttggacaggacttggagttagaaaatgttcgttcgagt
caacatcaaaccgagcctccaaaacgatttaccgaacccagtttggttaaaacgctcgaa
aaaactggggtgggccgtccttcaacttatgccaacatcatcaatactttgttagataga
gtttatgtcacgctggctaagaaaaatctgatggttacggagttgggtttgaaagttgat
gaacttttgtctaaagttgttcccgatgtaatagaccccggttttacggctcaactcgaa
gccaatttggacgagattgccgcaggtcaattgaactgggagaactggctgattgattgg
aattcacgggtgtttcaacccgccttaaataagggcaatcaagttatagaacgggtcgtt
tctgagcagttaacggagtttacttgccccatttgtgatgccaagttggaaaagcatcag
tacacgaaaaaccgagaactaaaaatgatgctgcgctgttcacaatcccgtcatcctgac
tgtcaagatgttacttattttcaaagcaatggcctgttctggagtccgaaatttggggag
ttgcccggacaaaaaaaacctaaactttcaggggttaagagtaaatctacaagtaaagtg
tctagaagtaaaaggagaaaacgttaa
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