Entry |
|
Name |
(GenBank) ATP-dependent helicase
|
KO |
|
Organism |
csau Capilliphycus salinus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csau00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACL6C3_16920
03430 Mismatch repair
ACL6C3_16920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:csau03400]
ACL6C3_16920
Enzymes [BR:csau01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACL6C3_16920
DNA repair and recombination proteins [BR:csau03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACL6C3_16920
MMR (mismatch excision repair)
Other MMR factors
ACL6C3_16920
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4071342..4073741
|
AA seq |
799 aa
MTDDFEPPFNSTSSQTPTLDPASLSLRSNGLDSKAISASTEAALQKIRSTLRPGQQQMAD
WKGGLLAVSAVPGAGKSTGMATAAAIAIARYGLSSRRQLVVVTFTRAAAANIRSKINEKL
KDLGLPTGGFVVYTLHALALNIARQHPELSGLDLENSTLILPTPSNRLTRTCVELWINDY
PRHYQRLIEGMQFDGEETERLRRQSVLRTEVLPDLSWKVIQEAKSSGLTPSDLRDLATRI
PNEYEILAIAAGLYENYEKLLKQRQLIDYDEMILGALRVLKDDRVRQQWQQRVFAVFEDE
AQDSTFLQTKLLKKLAQDSNSEDVFNLVRVGDPNQAINSTFTPADPIYFRDFCQDCKNQD
RLATMDRAGRSSQIIIEAANYVLKWVNDSQVSGIEKPFQEQEIHPVSEDDPQPDSNPAPT
GSGLELYRPVDIYHTVQLIAERVIQLIQENKEGKFAILVRENKQGEFISNLLNNPQESGF
KVDLSEYPIRIYDVSLAARQSRIPAELLSLLQFIDRPHSPDYLKAALKVFSDRQLIPNQD
FNALAIQPEEFLYPGPLDTKPSDDKIHKCRRFCRSLLQARLELAPFQLISFLALTLQYEK
SELATADKLAERIVKQTAGNNSIPAIVNVLNEIVSSERFETVDIDENESNESVYTRPGQL
TIITMHKAKGLDWDYVFLPFLHEQTIPGNLRVLPQSRFLGEFTLSEVARAQIRAYLHDKN
TLLDVMTAWEQAGFLKTAEEYRLLYVAMTRAKRLLWMSAATKAPYSWHKPENLQDQKPCP
ILPALKARFPHHFLGSGSE |
NT seq |
2400 nt +upstreamnt +downstreamnt
ttgacagacgattttgaacccccatttaactcaacttccagccagacgccaaccctcgat
ccggcgtcactttcgttgagatcaaacggtttggactcaaaagcgatctcagcctctaca
gaagccgctttgcagaaaattcgctccactttgcgtcccggacagcaacaaatggcagac
tggaaaggtgggcttttggcggtgtcggcggtaccgggggcgggaaagtctacgggaatg
gctacagccgccgccattgcgatcgcccgttatggtctaagtagccgccgtcagttggtg
gtggtcacgtttactcgggcggcggcggcgaatattcgctctaaaattaatgaaaaactc
aaagatctcggtttaccaacgggcggttttgtggtctataccttacacgccctggcgtta
aatatcgcccgtcaacatccggaattatcgggtttagatttagaaaattcgacgctaatt
ttaccgactccgagcaaccgtttaactcgaacttgtgtagaattgtggatcaatgattat
cctcgccactatcaacggttaatcgaaggaatgcagtttgatggggaagaaaccgaacgt
ttgcggcgtcagtctgtattgagaacagaagttttaccggacttatcttggaaagtaatt
caagaggcaaaaagttcggggttgacgccttctgacttgcgagatttagcgacgagaatt
cccaatgaatatgagattttagcgatcgctgcgggactgtatgaaaattacgaaaaacta
ctgaaacaacgtcagttaattgattatgatgagatgattttaggagcgttgcgagtctta
aaagacgatcgggttcgtcaacagtggcaacagcgagtgtttgcggtgtttgaagacgaa
gcccaagattctacctttttacaaacaaaattattaaaaaaattagcccaagattctaat
tcagaagatgtcttcaatttagttcgggttggcgatccaaatcaagccattaattccacc
tttactcccgccgatccgatttattttcgcgacttttgtcaggactgtaaaaatcaagac
cgtttggcaacaatggatcgggccggtcgaagttctcaaattattattgaggcggctaat
tatgtgttaaaatgggtgaacgattctcaggtttccggaatagaaaaaccgtttcaagaa
caagaaattcatcccgtttctgaagacgatcctcaaccggattctaatcccgccccgacg
ggttccggtttggaactttatcgacctgttgatatttatcatactgttcaattaatagcc
gagcgagtcattcaattaattcaagaaaataaagagggaaaatttgccattttagtccgg
gaaaataagcagggcgaattcatttcaaacttattgaataacccgcaagaatcaggcttt
aaagtcgatttaagcgaatatcctattagaatttatgatgtgtctttagccgcccgacag
tcgcgcattcccgcagaacttttatccctattacaatttattgatcgcccccattctcca
gattatctcaaagccgccttaaaagtatttagcgatcgccaattaatccccaatcaagat
tttaacgcattagcgattcaaccggaagaatttctctatcccggccccctcgatactaaa
ccatcggatgataaaattcacaaatgtcgccgtttttgtcggagtttattacaagcccgt
ttggagttagccccctttcaactgatctcatttttagcgttaaccttgcaatacgaaaaa
agcgagttagccaccgccgataaattagccgaaagaattgttaaacaaactgcggggaat
aattcaattccagctattgttaacgtgttgaatgaaattgttagttcagaacgatttgaa
accgttgatattgacgaaaatgaatccaatgaaagcgtctacactcgccccggacagcta
acaattattaccatgcacaaagccaaaggtttggactgggattatgtgtttttacccttt
ttacacgaacaaactatacccggaaatttgcgggttttacctcaaagtcgcttcttagga
gagtttaccctttcagaagtcgcacgggcgcaaattcgggcttatttacatgacaaaaat
accttgctggatgtaatgaccgcttgggaacaggcggggtttttaaaaaccgcagaagaa
taccgtttattgtatgttgcgatgaccagggcgaaacggttattgtggatgtctgcggcg
actaaagccccttattcttggcacaaaccggaaaatttacaagaccaaaaaccctgtcca
attttacccgcgttaaaagcccgttttccccatcattttttagggtcgggttccgaatag |