Capilliphycus salinus: ACL6C3_17495
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Entry
ACL6C3_17495 CDS
T10919
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csau Capilliphycus salinus
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csau03400
]
ACL6C3_17495 (sbcC)
DNA repair and recombination proteins [BR:
csau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACL6C3_17495 (sbcC)
Archaeal homologous recombinant proteins
ACL6C3_17495 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
ABC_tran
Rad50_zn_hook
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
XNO67783
LinkDB
All DBs
Position
4220433..4223486
Genome browser
AA seq
1017 aa
AA seq
DB search
MIPHKLTLKNFLSYRDASLDFSGLHTACICGPNGAGKSSLLEAIAWAIWGSSRAATEDDI
IHLGETEAQVDFAFIGEGNLYRVIRNRRRGQSGTLEFQVATKPYDEIQKGAKIEFRPIGE
RGMRATQQKILDQIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILASLLKLNEYDNLA
ERSKDFSRQYKAKIELLQQTIDSTKQQLQQQTEITQNIAKLETTLNQLNSQQTAEREKLQ
QLQAGQHHRQTWEKLRQGEQQQYQTLSQDYQRLQQEFNSTQQQQQELEAVLKQASEIQAG
YSLFQTLQATEERLSAQFKTYQEAQQNRQKLLEQQRQILQQFQQKIQNLNVQLDGLAQQE
NEQLEVLKQRPEVEAALIELQTARNHLTQLDELQVKVTPLLQQRQQLQSQIDRASATLIA
RLEELSKSIRQVQQRVQIHPELQQSLQQLNAQIQELDNKRVYQKRVQEKGLERHNYIEKL
CSRQRDYETKLAELDHKISLLGTPLNGEKTESSAMPLCPLCDRPLDEHGWNLVVGKHRTQ
QQEIRDQIWVINEQLAVAEREIQGFRQEYRQLDRELAPYEEYREQRGQIQAKLEGIEESQ
LRYQQLKLEAKEIESSLQTGEFAVELNGELQQLDRQLQQLNYNEQSHVLARNEEKRWRWA
EIKQSQLQSAESKLTKIREQKPELEAKKSALEQQLTQQQTDSELHQQIAALERTLAEIGY
NLEEHNQVRSQLRQAQQWITRAEKLNSAQQQYPKLQQRSEQLQQLKAGKAQDLKTVKTQI
DLLEQKLKETPDLSPEIQQLEQQIQQRRQQMDRTLSQLGSLKQQQAYLESLNAQHTEQKQ
QLETNRRQYRVYSELAQAFGKNGIQALMIENVLPQLEAETNHILSRLSANQLHIQFITQR
AGRSSKSSKKKTAKLIDTLDILIADAQGTRPYETYSGGEAFRINFAIRLALAKLLAQRAG
TALQMLIIDEGFGTQDAEGCGRLIAAINAISSDFACILTVTHMPPFKRSISSENRSK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgattccacacaaactgacactcaaaaactttctgagctatcgagacgccagcctggat
tttagcggactgcacaccgcttgcatttgcgggcctaatggggcggggaaatcttcgcta
ctcgaagcgatcgcctgggcaatttggggcagtagtcgcgccgccacagaagatgatatc
attcatctgggagaaacggaagctcaagttgactttgcctttattggagaaggaaacctc
tatcgggtgattcgcaaccgccgccgaggtcagtcgggaacgttggaatttcaggtggca
accaaaccctatgatgaaattcaaaagggtgcaaaaattgagtttcgccccatcggtgaa
cggggaatgcgagcgacacagcaaaaaatattagatcaaattaaactcgattacgataca
tttattaattcggcctatttgcgtcagggaagggcggatgaatttatgctcaaacgtccg
accgaacgcaaagaaattttagccagtttattaaagctcaatgaatatgataatctagcc
gagcgctccaaagatttctcccgacaatacaaagcaaaaatcgaactgttgcagcaaaca
atagacagcacaaagcaacagcttcaacagcaaacagaaatcactcaaaatattgcaaaa
ctcgaaactacactcaaccaactcaacagccaacaaaccgcagaacgggaaaaattacaa
cagttacaagcgggccaacaccaccgccaaacctgggaaaaattgcgtcagggcgaacaa
caacaatatcaaaccctctcccaagattatcaacgacttcagcaagaatttaacagcact
caacagcaacagcaagaactcgaagccgtcttaaaacaagcctcggaaatacaagccgga
tacagtttatttcaaaccctacaagccacagaagaacgcctgtcagcccaattcaaaacc
taccaagaagcccaacaaaaccgccagaaactcctagaacaacagcggcaaattttgcag
caatttcagcaaaaaatacaaaatctaaacgtacaattagacgggttagcccaacaagaa
aacgaacagttggaagtgctaaagcagcgcccggaagtggaagccgccctgatcgaatta
caaaccgcccgcaaccatttaactcaactcgatgaactgcaagttaaagtaacacctcta
ctccaacaacgccaacaattacaaagccaaatagatcgcgcttctgcgactctgatcgcc
cgtttagaggagttatccaagtccattcgtcaagtgcaacagcgggtgcaaattcatcca
gaattgcagcaaagtttgcaacaactgaacgcccaaattcaggaattagacaataagcgg
gtttatcaaaaaagagttcaagaaaaaggactggaacggcacaattatatcgaaaaattg
tgttctaggcaacgggattatgaaacaaaattggcggaattagaccataaaattagcctg
ttgggaacgcctttaaacggggagaaaaccgagagttcggcgatgcctttgtgtccgctt
tgcgatcgccccctcgacgaacacggctggaatttagtggtcggaaaacaccgaactcag
cagcaagaaattcgcgatcaaatttgggtgatcaacgaacagttagccgtcgccgagcga
gaaattcaagggtttagacaggagtatcgccagctagatcgggagttggcaccctatgag
gaatatcgagaacaacggggacaaattcaagctaaattggagggaatagaagaatctcaa
ttaagatatcaacagctaaaattggaagcaaaagaaatagaaagctctttacaaacgggc
gaatttgctgtagaattaaatggggaattgcaacaactagatcgtcagttacaacagctt
aattataacgaacagagtcacgttttagcccggaacgaagaaaagcgctggcgttgggcg
gaaattaagcaaagtcaactgcaaagcgccgaaagtaagttaaccaaaattcgggagcaa
aaacccgagttagaagcgaaaaaatccgctttagaacaacagttaacccaacaacaaacc
gactcggaattacatcagcaaattgcggcgttagaacgtacccttgccgaaatcggctat
aatttagaagaacacaatcaagtgcgatcgcagttgcgccaagcccaacagtggataaca
agggcggagaaattaaattcagcccaacaacaatatccaaaacttcaacagcgctcggaa
caattacaacagttaaaagccggtaaagcccaagatctcaaaaccgttaaaactcaaatc
gacttgctggaacaaaaattaaaagaaacccccgatctcagcccagaaattcaacagttg
gaacaacaaattcaacagcgccgccaacaaatggatcgaaccttaagccagttgggaagc
ctcaaacaacagcaagcctatttagagagtttaaacgcccaacataccgaacaaaaacaa
cagttagaaaccaatcgccgtcaatatcgcgtctatagcgaactcgcccaagccttcgga
aaaaatggcattcaagccttaatgatcgagaatgtattaccgcaattagaagcagaaacc
aatcacattttatcacgattatcagccaatcaattacacattcagtttatcacccaacgg
gcgggacgcagcagcaaatcttccaaaaagaaaacggcgaaattaatcgatactttagat
attttaatcgccgatgcccaaggaactcgaccctacgaaacctattcgggcggggaagca
tttcggattaactttgccattcggttagcgctggcaaaattactcgcacaacgggcggga
acggcgctacaaatgctaattattgacgaaggttttggcacccaagacgccgaggggtgc
gggcgtttaattgccgctattaacgccatttcctctgattttgcctgtattttaaccgtc
acccatatgcccccatttaaaagaagcatttcaagcgagaatagaagtaaataa
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