Capilliphycus salinus: ACL6C3_22460
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Entry
ACL6C3_22460 CDS
T10919
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csau Capilliphycus salinus
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csau03016
]
ACL6C3_22460 (truB)
Enzymes [BR:
csau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACL6C3_22460 (truB)
Transfer RNA biogenesis [BR:
csau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACL6C3_22460 (truB)
Prokaryotic type
ACL6C3_22460 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XNO68728
LinkDB
All DBs
Position
5552059..5552988
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AA seq
309 aa
AA seq
DB search
MQGFLNLNKPAGWTSHDCVARVRRLLKLKRVGHAGTLDPAAVGVLPLAVGKATRLLQFLP
AQKAYRATIRFGMTTTTDDLEGETLTTQNVAELNLEQIRTILPKFLGKIEQIPPRYSAIQ
VDGKRLYDLARQGKAVEVPKRTVEVFQLDVLGWNCGEFPELQLAITCGAGTYIRSIARDL
GEMLHTGGTLAHLVRTHSSGFDLTESLTIEVLESQIKQGTFQLIPPSTALKHLEAITLSS
VEDAKRWCQGQAVVCQAENTTNSIFRVYHPEGLFLGLGQTVLLDSQTVLKPQIVLADQSQ
VFLNPGKAN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctttctaaatctcaataaacctgcgggttggacatcccacgattgtgtggct
cgggtgcgtcgtctgctgaagttaaaacgtgttggacacgccggaacactcgatccggcc
gcggttggcgttttacctttggctgtgggaaaagcaacccgtttgctacaatttttaccc
gctcaaaaagcttatcgggcgacgattcgtttcgggatgaccaccacaactgatgatttg
gaaggcgaaactctcaccactcaaaatgttgccgaattaaatttagaacaaattcggacg
attttacccaaatttttagggaaaattgaacaaattcccccccgctatagtgcgattcaa
gtggacggaaaacggttatatgatttggctcgtcaaggaaaagcggtagaggttcccaaa
cgaaccgttgaagtttttcagttagacgttttgggctggaattgtggcgaatttcccgaa
ttacaattggcgattacttgtggggcgggaacttatattcgctcaattgctagagattta
ggggaaatgctgcacaccggcggaacgttggctcatctggttcgcactcacagcagcgga
tttgatttgaccgaaagtttgactatagaagtcttagaaagccagatcaaacaaggcacg
tttcaactcattcccccgtctactgctttgaaacacttagaagccattactctttcttcg
gttgaagatgccaaacgctggtgtcagggacaagctgttgtttgtcaggctgagaataca
accaactcgatttttagagtttatcatcccgagggtttatttttgggattgggtcaaacg
gttttactcgattcccaaacggttttaaaacctcaaattgttctggccgatcagtctcaa
gtttttctcaatccgggcaaggcaaactga
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