Capilliphycus salinus: ACL6C3_23030
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Entry
ACL6C3_23030 CDS
T10919
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csau Capilliphycus salinus
Pathway
csau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACL6C3_23030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csau03019
]
ACL6C3_23030
03400 DNA repair and recombination proteins [BR:
csau03400
]
ACL6C3_23030
Enzymes [BR:
csau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACL6C3_23030
Messenger RNA biogenesis [BR:
csau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACL6C3_23030
DNA repair and recombination proteins [BR:
csau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACL6C3_23030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
XNO68838
LinkDB
All DBs
Position
complement(5689109..5690560)
Genome browser
AA seq
483 aa
AA seq
DB search
MNTKDSHSLSWERVKAEFQRIWGYEDFRPPQGEIIRSLLSRQDALVVMPTGGGKSICFQL
PALLQTGLTLVVSPLVALMENQVQELREKNLPAALLHSQMPSLQRRQTLRLLEQNRLRLL
YLSPETLLSSSVWNLIAHPRILVNGLILDEAHCLVQWGDTFRPTYRRLGAIRPALLQLKQ
TQKNFAIAAFTATANPAAQDTIKTVLDLQNPKSFLLNPYRPNLNLNIQTVWTPRGRRQQL
LKFIQTRQKQTGLVYVRTRKDSEELADSLKLQGYQTAAYHAGLSGEERREIEQAWLKGSL
KFVVCTSAFGMGINKPNVRWVLHFQAPFLLSEYLQEVGRAGRDGKPAIALTLVSEPTGFL
YPEDKQRREYLQENWRKQYQQANQLIKKLPKQGEIEEISRQFRNSAIALSVLHSSGQLTW
QDPFHYIINSKAVAFPDHNTQAIKQMSQYLNTRQCRWRFLLEAFGFGKEAKSMACGHCDN
CRK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaaagattctcactcgctctcttgggaacgggtcaaagcggaatttcaacga
atttggggatatgaagattttcgacccccacaaggggaaattatccgcagtttattatcc
cgacaagatgcacttgttgtgatgccaacgggagggggaaaatcgatttgttttcaactt
ccggctttgttacaaaccgggttaacgttggtggtttcgccgctagtggcgttgatggaa
aatcaagtccaagaacttcgagaaaaaaaccttccggcggcgttattgcacagtcaaatg
ccttctctacagcgacgacaaacgttaagattgctagaacaaaatcggttaagattgttg
tatctttccccggaaacgttgctaagttcatcggtgtggaatttgattgctcatccgcgt
attttagtaaatggtttaattttagatgaggctcattgtttggtacaatggggggataca
tttagaccgacttatcggcgtttgggagcaattagacccgcacttttgcagctaaaacaa
actcagaaaaacttcgcgatcgcggcgtttacggcaacggcaaatccggcggcacaagac
accattaaaacggttttagacctacaaaatcccaaatcttttttactgaatccctaccgc
cccaatttgaatttaaacatacaaacggtttggactccgagagggcggcgacaacagctt
ttaaagttcattcaaactcgccaaaaacaaacgggtttggtgtatgttagaactcgaaaa
gacagcgaagaattggcagatagcctgaaactacagggttatcaaacggcagcgtatcac
gcgggtttaagcggtgaggaacgtcgagaaattgaacaggcttggttaaaaggttcgctg
aagtttgtggtgtgtacttcggcgtttgggatgggaattaataagccgaatgtgcgttgg
gtgctgcattttcaagccccatttttgctgtctgaatatttgcaagaagtcggacgggcg
ggacgggatggaaagcctgcaatagcgttaacattggtgagtgaaccgacgggtttcttg
tatcccgaagacaaacaacgccgtgaatatttgcaggaaaattggcgaaaacaatatcaa
caggcgaatcaactgattaaaaaattaccgaaacagggagaaattgaggagatatctcgc
cagtttcgcaacagtgcgatcgcgctttcggtgttgcacagttcgggacaattaacctgg
caagatccctttcattatatcattaattccaaggcggttgcgttcccggatcataatact
caagcgatcaaacaaatgagtcaatatctaaatactcgtcaatgtcgttggcggttttta
ttagaggcgtttgggtttggtaaagaagctaaatcaatggcttgtggacactgtgacaat
tgtcgaaagtaa
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