Capilliphycus salinus: ACL6C3_24710
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Entry
ACL6C3_24710 CDS
T10919
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
csau Capilliphycus salinus
Pathway
csau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACL6C3_24710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csau03019
]
ACL6C3_24710
03009 Ribosome biogenesis [BR:
csau03009
]
ACL6C3_24710
Enzymes [BR:
csau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACL6C3_24710
Messenger RNA biogenesis [BR:
csau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACL6C3_24710
Ribosome biogenesis [BR:
csau03009
]
Prokaryotic type
rRNA helicases
ACL6C3_24710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
UvrD-helicase
HEM4
AAA_30
AAA_19
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
XNO69155
LinkDB
All DBs
Position
6111165..6112601
Genome browser
AA seq
478 aa
AA seq
DB search
MSLSFVELGISEARAQHLESIGFTEPTPIQVQAIPQILSGRDIVGQAQTGTGKTAAFSLP
ILEQIDHKAKDVQALILTPTRELAMQVKDAIRKMSNERSLYVLTVYGGQSIERQIQRLDR
GVQIVVGTPGRVLDLLSRGDLRLDSIKWLVLDEADEMLSMGFIQDVEKILEAASENRQTA
FFSATIEPSIWKLVRKYLNSPVTVKVEQPKTTPKRIEQAVYTVPRGWTKSRALQPILELE
DPESAIIFVRTKQAAADLTSYLQGAGHSVDEYHGNLNQSQRERLLMRFRKRQVRWIVATD
IAARGLDVDHLTHVINYDLPDNAESYVHRIGRTGRAGREGKAITLLQPMDRRKLRLIERH
LRHNFTTLTIPKRSQIEARYIERLKDKVLEALTGERMASFLPIVAQLGEEYEPHAIAAAA
LQMAYDQNRPNWEETDYPQEEEVKPIPKPKLVGKKRRSSDSEPQKKSSEKKSSVGSGN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatcctttgtagaactaggtatttcagaagcccgcgctcaacatctcgaatcc
atcggttttaccgaacccactcccatccaggtgcaagcgatcccacaaatcctatcaggt
cgagacatcgtgggacaagcccagaccggaaccgggaaaaccgcagccttttcattgcca
atcctcgaacaaatcgatcacaaagctaaagatgttcaggctttgattttaactccaacc
cgagaactggcgatgcaggtcaaagacgccattcgcaaaatgagcaacgaacgctcatta
tatgtgttaaccgtctatggaggtcagtcgatagaacgacaaatccaacggttagaccgg
ggcgtccagattgtggtgggaacacccggacgggtattggatttgctcagtcggggcgac
ctcagacttgatagcatcaagtggttggttctcgacgaagcggacgagatgctgagtatg
ggatttattcaagatgtggaaaaaatcctagaagcggcttcagaaaaccgacaaacggct
ttcttctcggcaacaattgagccttcaatttggaaattggtgcggaagtacctcaattct
cccgtcaccgtgaaggttgaacagccgaaaaccacgccgaaacgcatcgaacaggcggtt
tatacggtgccgcgtggttggacgaaatcccgtgctttacaaccgattctcgaactcgaa
gacccggaatccgcgattatttttgtccgcaccaagcaagcggcggcagatttgaccagc
tacctacaaggggccggtcacagcgttgacgaatatcacggcaacttgaaccagtcccaa
cgggagcggctgctgatgcggttccgcaagcgtcaggtgcgctggattgtggcgacggat
atcgccgcacggggtctggatgtggatcatttgacccacgtgattaactacgatttgccg
gataacgccgaaagctacgttcaccgcatcggtcggacgggtcgcgccggacgggaaggg
aaggcgattacgttgttgcaaccgatggatcgccgcaaactgcgcttgattgagcgtcac
ctgcgtcacaattttaccacgctgacgattcccaagcgatcgcaaattgaagcgcgctat
atcgaacgcttgaaagataaggtgttagaagccttgaccggcgagcggatggcgtcattc
ttacccattgtcgcacagttgggcgaagaatacgaaccccacgcgatcgcggcggcggcg
ttacaaatggcttacgatcagaatcgtcccaattgggaagaaaccgattatccccaagag
gaagaggttaagcccattcctaagccgaagttggtgggtaaaaagcgccgttcttctgat
tctgaaccgcagaagaagtcctcagagaagaagtcttctgtcggtagcgggaattaa
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