Capilliphycus salinus: ACL6C3_28500
Help
Entry
ACL6C3_28500 CDS
T10919
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csau Capilliphycus salinus
Pathway
csau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACL6C3_28500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csau03021
]
ACL6C3_28500
03400 DNA repair and recombination proteins [BR:
csau03400
]
ACL6C3_28500
Enzymes [BR:
csau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACL6C3_28500
Transcription machinery [BR:
csau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACL6C3_28500
DNA repair and recombination proteins [BR:
csau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACL6C3_28500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
Herpeto_peptide
Motif
Other DBs
NCBI-ProteinID:
XNO69862
LinkDB
All DBs
Position
7026540..7030631
Genome browser
AA seq
1363 aa
AA seq
DB search
MTDNKKIFRNQIIDKKQLKKLISWAFTHHGTARTAQIADELKDMGFHYATRAGVSISVED
LQVPPSKRGLLDEAQEEIRRTERRYTKGEITEVERFQKVVDTWNGTSEALKDEVVRNFKS
TNPLNSVYMMAFSGARGNISQVRQLVGMRGLMANPQGEIIDLPIKTNFREGLTVTEYIIS
SYGARKGLVDTALRTADSGYLTRRLVDVAQDVILREFDCGTEQGIVLRSMTDGERTLIPL
QDRLFGRVLATDVTHPETGEIVSFEGKQAVRNQPICADLAIAIAESGVKEVNVRSPLTCE
ATRSVCQHCYGWSLAHGSMVDLGEAIGIIAAQSIGEPGTQLTMRTFHTGGVFTAEAAEII
KAPFDGVVRFPKKLRLRAFRTRHGDDAFYIENNGQISIENGDRTQSLNVSQGSTLIVQNG
QSVVAEQVLVEIPAGGRTARKTTEKATKDVATDLAGEVKFADVIAEEKTDRQGNMTRIAA
RGGLIWILSGEVYNLPPGAEPIVKNGDRVEHGSVLAQTRLVSEHGGIVRIASSENRLSQP
TDSIDTALSEPTMTAVTPTTAPLSELPREIEIITASVLLDQALVRIQQLQGREQYVIETT
NNNRFLLKVTPGSKVENHEVIAELMDDSYRTATGGIIKYAGVEVAKRSKAKLGYEVIKGG
TLLWIPEECHEVNKDISLLLVEDGQYVEAGTEVVKDIFCQSNGVIEVTQKNDILREIVIK
PGELHLVDDPEMVMAIDGQIVNPGQEVIPGIVAQELHYVEYVETPEGPALLLRPVTEFAV
PETPPIPSQESLNESISLQAVQRLTYKDGERVRSVEGVELLRTQLVINIGTEAPQLAADI
ELIPHEEDPELMRLQLVILESLVIRRDIVADTTQGSTRTRLLVKDGDEIEPGAVVSRTEI
LCKEGGIVRGIRSGAEILRRILVVRDADQMKIDLPAGVTPSVKSGQLVVEGSALAPEVTL
PDSGEIIAIHKPKAKSAQTEAEPAADGESQLATTVGESTQVVLRLGRPYRVSSGAILHLS
DGDLVQRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACILAKHPGTAQVTVTDE
IVELRVIENDGTITDYPLLPGQTVIVSDGQTVEVGQPLTDGPANPHEILEVFFNYHQARD
GIYEAALLSFQKCQTFLVNEVQSVYQSQGIDISDKHIEVIVRQMTSKVRIDDGGDTTMLP
GELVELRQVEQVNEAMSITGGAPARYTPVLLGITKASLNTDSFISAASFQETTRVLTEAA
IEGKSDWLRGLKENVIIGRLIPAGSGFNAYEELGVGDFSLTDNGMNYLEDEEMELQDVVL
DDRTARKMDRGDLDNDQDSDEFLKDNNSLFLDDELIDDGYEED
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaacaaaaaaatcttccgcaatcaaattattgataaaaaacaactcaagaaa
ctgatttcttgggcatttacccatcacggtaccgcccgtaccgctcaaattgccgacgaa
ttaaaagatatgggattccattatgccacacgcgccggagtctctatcagtgtcgaagac
ttgcaagttcctccttctaaacggggtcttctcgatgaagcccaagaagaaattcgtcgg
acagaacgccgctataccaaaggggaaatcaccgaagtagagcgctttcagaaggtggtt
gatacctggaacggcacctcagaagccctcaaagatgaagtggttcgcaactttaaatcc
accaatcccctcaactccgtttacatgatggcatttagcggcgcaagaggcaacatctct
caggtgcgccagctagtcggaatgcggggactgatggcaaacccccaaggggaaattatc
gacttgccgattaaaaccaacttccgcgaaggattaaccgttaccgaatatattatctcc
tcctacggggcgcgtaaaggtctggttgatacggcgctgcggacggctgactcgggatat
ttaacccgccgtctggtagacgtcgcccaagatgtgattttgcgggaatttgactgcgga
accgaacaggggattgtcctgcgaagcatgaccgatggggaacgcaccctgattcctttg
caagatcggttattcggacgggtgctggcgaccgatgtcacccatcccgaaaccggggaa
atcgtcagctttgaagggaaacaagccgttcgcaaccaacccatttgtgccgatttagcg
attgcgatcgccgaatctggggtcaaagaagtcaatgtccgcagtccgctcacctgcgaa
gccacccgctcggtttgtcagcattgctacggctggagtttggctcacgggtcgatggta
gacttgggagaggcgatcgggattattgccgcacaatcgattggtgaacccggaacccag
cttaccatgcggacgttccacacgggaggggttttcaccgcagaagcggccgaaattatt
aaagcgccctttgatggggtggttcgttttccgaagaagctgcgtttgcgggctttccgc
acccgtcacggggatgatgctttctacattgaaaataacggtcaaataagtatcgaaaat
ggcgatcgcacccaatcgttaaacgtctctcaaggaagcaccctgattgttcaaaatgga
caatctgttgttgccgaacaggtgttagtggagattcccgcaggcggtcgtacagcccgg
aaaaccaccgaaaaagccaccaaagacgtggctacagacttggcgggtgaggtgaaattt
gccgatgtcatcgccgaagaaaaaacggaccgtcaggggaatatgacccgcatcgccgcc
cggggcggtttgatttggattttgtctggtgaagtgtacaacttacctccgggggctgaa
ccgattgttaaaaatggcgatcgcgtggaacatggcagtgtactcgctcaaacccgctta
gtctccgaacatgggggaattgttcggatcgcgagttcggaaaatcggctttcacagcct
accgatagtattgacaccgctttgagtgaaccgacgatgacggctgttactcccacaacc
gccccgttatcggaacttccccgtgagattgaaattatcaccgcttcggtgttgttggat
caggcgttggtgcggatacagcaactccagggtcgggaacaatatgttatcgaaaccacg
aataacaatcgcttcttgctgaaagttacgcctggaagcaaggtggaaaaccacgaagtg
atcgccgagttgatggatgatagctaccggacggcgaccggaggtattatcaaatatgcc
ggggttgaagttgccaaacgcagtaaagccaaactcggctacgaggtgatcaaaggcggt
actctgctctggatacccgaagaatgtcacgaagtcaataaagatatttcgctgttgttg
gtcgaagatggtcaatatgtcgaagccggtaccgaagtggtgaaagacattttctgtcag
tccaacggcgtgattgaagtgactcagaaaaatgacattttgcgggagattgtgatcaaa
ccgggtgaactgcatttggttgatgacccggaaatggtcatggcgattgatggtcagatt
gtcaaccccggacaggaagtaattcccggtatcgtcgctcaagaattacactacgttgag
tatgtggaaacacccgaaggtccggctttattgctgcgaccggtgactgagtttgcggta
ccggaaactcccccgattccgtctcaagagtctttaaacgaatcgatttcgctgcaagcg
gtacaacgcttaacttacaaagacggtgaacgggtgcgttcggtcgagggcgtcgaactg
ttgcggactcaactggtgattaatatcggcaccgaagccccccaattggcggccgatatt
gagttgattccccacgaagaagacccggaattgatgcgcctgcaattggtgattttagag
tctttggtcatccgccgggatatcgtcgccgatacgactcaaggtagcacccgcacccgt
ttgttggttaaagatggggacgaaattgaacccggcgccgtcgtcagccgtaccgaaatt
ctctgtaaagaaggcggtattgttcgcgggattcgttccggggcggaaattctccgacgg
attttggtggtgcgcgatgccgaccaaatgaaaattgaccttcccgcaggggtgacgccg
agtgtgaaatcgggtcagttggtggttgaaggtagcgctcttgcgcctgaagtcacttta
ccggattctggcgaaattatcgcgattcacaaacccaaagcgaaatctgcccagacggaa
gccgaacctgctgctgatggggaatctcaattggcgacaacggttggcgagtcaacacaa
gtcgtcctgcgtctgggtcgtccttatcgcgtgtcttccggggcgattctacacctgagc
gatggagatttggtacaacggggcgataacttggtgttgttggtgtttgaacgggcgaaa
actggggatattattcagggtttacctcggattgaggaacttctagaagcccgcaaaccg
aaagaagcttgtattcttgccaaacatccgggaactgctcaagtaactgttaccgatgaa
attgtcgaattgcgggtgatcgaaaatgatggcacgattaccgattatcccttgttaccg
ggacaaacggtgatagtttccgacggacaaaccgttgaagtgggtcaaccgttaaccgat
gggcctgccaatcctcacgaaatcttggaagtcttctttaattatcatcaagcccgagat
gggatttatgaggcggcgttgctttcgttccaaaagtgccaaactttcttggtgaatgaa
gttcagtcggtttatcagtctcaggggattgatatttctgacaaacacattgaggtgatt
gttcgccaaatgacctcgaaggtgcggattgatgatgggggcgatacgacgatgttaccg
ggtgagttggttgaactgcgccaggttgaacaggtcaatgaagcgatgtccattaccggg
ggcgctcccgctcgttatactccggtgttgttggggattaccaaggcatccttgaatacc
gatagtttcatctcggcggcgagtttccaagaaacgactcgcgtgttaacagaagcggcg
attgaaggaaaatcagactggttgcgcggtttgaaagaaaacgtgattatcggtcgtttg
attcccgcaggtagtggatttaatgcctatgaagaactcggtgttggtgattttagcctg
accgataatggcatgaattacctcgaagatgaggaaatggaattgcaggatgttgttctt
gacgatcgcaccgcccgcaagatggatcgcggcgatctcgacaacgatcaagattccgat
gagttcctcaaggataataattctctgtttcttgatgatgaactcatcgatgatggctat
gaggaagattag
DBGET
integrated database retrieval system
