Cannabis sativa (hemp): 115694684
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Entry
115694684 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115694684
KO
K24260
WD repeat-containing protein 11
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115694684
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csav03037
]
115694684
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Others
Others
115694684
Cilium and associated proteins [BR:
csav03037
]
Other cilia and associated proteins
Other cilium assembly proteins
115694684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
ANAPC4_WD40
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
115694684
NCBI-ProteinID:
XP_030477628
UniProt:
A0A803Q9Q7
LinkDB
All DBs
Position
6:complement(15107620..15119391)
Genome browser
AA seq
1349 aa
AA seq
DB search
MATPRPATSPTTTAVATAAPPLPHDSWDCMLPGPPSRSNFGSADLSSSGLIAFAAGSSIS
VVDSRSMQLVATVPMPPPASNSSSSLSPFVTSLRWTPLPLRRDLLTTEPSSSHLLLAAAD
RQGRIALIDLRLRSPVLWFESDAARLSVQDLCWVQARPDSYLLAAISGPSSLSLYSTTTG
RCVWKYDASPEFLSCIRRDPFDARRFCVIGLKGFLLSVKVLGETENDVVIKEFQIRTDCT
ELQKLERDAANGGTTSTSPASAIFPLYMVKFAFSPQCRHIVFVTFPKELVVFDLQYETVL
FSTALPRGCGKFLDVLPDPNNGFLYCAHLDGKLSTWRRKEEEQVHTMCAMEELMPSLGTS
VPSPSLLAAIICHSDSTLQKVGKLYSETPNSQDFDSPFDFCDEPPLVSKTCLVSIFDDGK
IWNWLLTVEGVEDAQKENSSVGLVADVSEVPILGDNSNETVSSVKGPAREEGKQKEYVPG
SRSRHAKSTSKQIDMSFKISLVGQLQLLSSQVTMLAVPSPSLTATLARGGTYPAVAVPLV
ALGTQNGTIDVVDVSANALAASFSVHNGMVRGLRWLGNSRVVSFSFSQANEKSGGYINKL
VVTCLRSGLNRPFRILQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKSPIMLRSL
ALPFTVLEWTLPTAPRPGQTGSAKPSSLSPKDRASGEPDGASCPTKASSSDSKSSDGSQE
ETSESFAFALVNGALGVFEVHGRRIRDFRPKWPSSSFVSSDGLITAMAYRLPHVVMGDRS
GNIRWWDVTTGQSSSFNTHREGIRRIKFSPVVAGDRTRGRIAVLFYDNTFSIFDLDSPDP
LANSVLQPQFPGTLVLELDWLPLRTDKNDPLVLCIAGADSSFRLLEVNVIDKRLGYVPQM
RSTKERFRPMPLCSPILLPTPHALALRMILQLGVRPSWFNTCSTTLEKRPHLIPGTPSST
GDLRKYLIDLPPIGDPVVPELLLKILEPYRKEGCILDDERAKLYAKMVNRGCVMRFAFAA
AVFGESSEALFWIQLPRALNHLMRKLVNKPPQKAPASMSNPELDDTSILSRISSKGKSMP
GTKKKDPLSQGSLSLMAFEQEELWANANERILWHEKLEGEEAVQNRVHELVSVGNLESAV
SLLLSTNPESKYFYVNALRAVALSSAVSGSLLELAVKVVAANMVQTDRSLSGTHLLCAVG
RYQEACSQLQDAGCWTDAATLAATHLRGSDYARVLQRWADHVLHIEHNLWRALILYVAAG
ALPEALAALREAQQPDTAAMFVLACREIHSEIISSLDLDDETSSSTNEKLLKLPGLDPEN
EDVIAVCEYYGQYQRKLVHLCMDSQPFSD
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagaccggcgacgtcgcccacgacgacggcggtggccacggcagcaccg
ccacttcctcatgattcctgggactgtatgcttcccggtccaccgagccgaagcaacttt
ggatccgctgatttgagctcttccggtctcattgctttcgctgctggaagctctatctcc
gtcgttgactctcgatccatgcagcttgttgccactgtcccaatgccgcctccggcttct
aattcttcttcttcgctctctccgttcgtcacttccttacgatggaccccactccctctt
cgccgcgaccttctcactactgagccctccagttctcaccttctcctcgccgctgctgat
cgccaaggccgaattgctctcatcgatcttcgactcaggtcgccggttctctggtttgaa
tcggacgcagcccggcttagtgtccaggatctatgttgggttcaggcacggcccgactcg
tatctcctcgctgctatctctggtccatcgtctctctctctttacagtaccactaccggt
cgttgcgtctggaagtacgatgctagccctgaattcctgtcctgcattcgccgtgatcct
tttgatgctcgccgtttttgcgttattggactcaaagggttcctcttgtcggtcaaagtt
cttggggagactgaaaacgatgtcgttataaaggaatttcagattcggactgattgcacg
gagttgcagaagctggagagggatgcggccaatggggggacgacgtctacgtcgccggca
tcggctattttcccattgtatatggtgaagtttgccttttcgcctcaatgtaggcacatt
gtattcgtgacgtttccaaaagagttggtagtatttgatttgcagtacgagactgtgcta
ttttcaactgcgttacctcgtggttgtggcaagtttctggatgtgttgcccgatccgaat
aatggatttctctattgtgctcaccttgatgggaagctcagtacctggcggcgaaaagaa
gaagaacaggttcacacaatgtgcgcaatggaagagttgatgccgtcattaggcacatct
gtcccttctccttcacttcttgctgccatcatctgccattcagattccaccctccaaaaa
gttgggaaactttattctgaaacacctaattctcaggattttgatagcccgtttgatttt
tgtgatgaacctccacttgtttcgaagacctgtttggtctctatttttgatgatggaaaa
atatggaactggttactgactgttgaaggagtggaagacgctcagaaggaaaatagtagt
gtgggcttggttgctgatgtaagtgaggtgcctatcttaggggataatagtaatgaaaca
gtttcttctgtcaaaggacctgctagggaagaagggaagcaaaaggagtatgtgcctggt
agcagaagccgccatgctaagtctaccagcaagcaaatagatatgtcatttaagattagc
ttagttggtcagcttcagcttctttcttcacaagtgacgatgctggctgtaccatcgcct
tctttaacagctaccttggctcgtggaggaacatatcctgctgtagctgttccattggta
gctttgggaactcaaaatgggacaattgatgtcgttgatgtttcagctaatgctcttgct
gcaagtttctctgtccataatggtatggttaggggattacgatggcttggaaattcaagg
gttgtttcattttcatttagccaggcgaatgagaaatctggaggttatatcaacaaactt
gttgtgacctgtctgagaagtggccttaatagaccattccggatactacaaaagccagaa
cgtgcacccataagagctctaagggcctcttcctctggcagataccttctaatcttgttt
cgcgatgcaccggtagaagtttgggcaatgactaaaagtcctattatgcttagatcatta
gcacttccatttacggtgttggaatggaccctcccaacagctcctcggcctgggcaaact
ggatctgctaagccatcgtcattatcccccaaagatcgtgcatctggagaaccagatgga
gcatcttgcccaacaaaggcttcttcaagtgattccaagagctcagatggatctcaagaa
gagacttctgagagctttgcatttgctctagtaaatggtgctcttggagtttttgaggtt
catgggagaaggatccgtgacttcaggccgaaatggccttcttcttcatttgtttcatct
gacggactaataacagccatggcctaccgcttgcctcacgtagttatgggagacaggtcg
ggaaacattcgctggtgggatgtaacaactggacagtcgtcttcattcaacactcataga
gaaggaatccgaaggatcaaattctcccctgttgtagctggagaccgaactagagggcgc
atcgctgtgctgttttatgacaatacattttctatttttgatcttgattcaccagatcca
ttggcaaattcagttttacagcctcagtttcctggaactcttgttctggaacttgattgg
ttacctttgcgaactgataaaaatgatccgttggtgctttgcattgccggagctgatagt
agcttccgtcttcttgaggttaatgtaattgacaaaagacttggttatgtgccccaaatg
aggtctacaaaagaacgattccggccaatgcctttgtgttctcccatactactgcctaca
ccgcatgccctggcattacggatgatcttgcaactaggtgtaagaccatcatggtttaat
acctgcagtacaactttagaaaagagacctcacttaattcccggaactccttcatccaca
ggagaccttcggaagtacttgattgatttaccacctattggtgaccctgtagtgccagag
ttgctacttaaaatattagaaccttatcggaaagaaggctgcattcttgatgatgagagg
gcaaaattatatgctaaaatggtcaatagaggttgtgttatgaggtttgcatttgctgct
gctgtttttggtgaatcctctgaagcacttttctggatacaactaccgcgtgctctcaac
catttgatgaggaagttagtaaataagcctccccaaaaggctccagcatcaatgtccaat
cctgagcttgatgatacatctattctgagtaggatatcatcgaaagggaaatcaatgccc
gggacaaaaaagaaggatccattgagtcaaggtagcctcagcttgatggcttttgaacaa
gaagagttgtgggcaaatgctaatgagcgtattctttggcatgagaaactggagggagaa
gaggctgttcaaaatcgcgtacacgagcttgtgtccgttgggaatttagaatctgcagtt
agcttattgctttcaactaatcctgagagcaaatacttttatgtgaacgctctccgtgca
gttgctctttcttctgctgtgtcaggctctcttcttgaacttgcagtaaaggttgttgca
gccaacatggtccagactgacaggtcactgtctggcactcatcttctctgtgctgttgga
aggtatcaagaagcttgttctcagcttcaagatgctggttgctggactgatgctgcgact
ttagctgctactcatctaaggggatctgattatgcaagggtattgcaaagatgggctgac
catgtccttcatatagaacacaacttgtggagggctctgattttgtatgttgcggctgga
gcactgccagaggcattggcagctcttcgtgaagcacaacaaccagacacagctgccatg
tttgtccttgcttgccgtgaaatacactcagaaatcatctccagtttggacttggatgat
gaaactagttcctctaccaatgagaaactgcttaagttgcctggtttggacccagagaat
gaagatgttattgcagtttgtgaatattatggacaatatcaaagaaaattagtgcatcta
tgcatggactcacagccattctcagattga
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integrated database retrieval system
