Cannabis sativa (hemp): 115694694
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Entry
115694694 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115694694
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
csav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115694694
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115694694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115694694
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
115694694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
115694694
NCBI-ProteinID:
XP_030477637
LinkDB
All DBs
Position
6:1767641..1771463
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AA seq
731 aa
AA seq
DB search
MDEDGGEQMDQFHRNEAISAVADEGFLGEEEEDDDYEDLYNDVNVGEGFLQSMRKNEDSG
FGNEVVEEKKIEQQQQQQQVPLVAQEAAVSIPGVGGGSGEGTGGGDVGARVAAGRVGGEG
YSNSNNQNLGFRGGEMGLKVNVGSGPSVGGGSGMRVELGQGSSKMNDFEEQSGNTSVGVH
VIGQQPQQQQQPQQLQQQQPPPPQQVPPPHVGVVGNVGNMVGDGMMRQPGVGVNVNGVGG
NNVVGGVGVGVGVGGGGGGTILFVGDLHWWTTDSELESELCKYGQVKEVKFFDEKASGKS
KGYCQVEFYDPAAATACKEGMNGHLFNGRPCLVAFASPFSVKRMGEAQVNRNQQMTQTNV
AQARRPNDTGVKPGGNNIATGGNYQGADNNTNTNNNNRGFGRGNWGRGNAQNMGNRGPVG
PMRNRGGGMSGRGIMGNGGNGFGQGLGATPPLLHPQSMMGQGFDPAFGAPMGRMGSYGGF
PGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTAGVDGPNMGMW
SDPSMGGWGGGEEHGGGRAAESSYGEEAASDHQYGEVSHDRGGGWPNPMKEKDRGSERDW
SGSSDRRYREDRDQAYERDVPREKDTSHDDWSERRHRDDRDAGRERERERDRDRERSRDR
ERERDRDRHREDRDRYADHHRYRDRETEHDDEWERGRSSRTHNKGRVSQEDDHRSRSRDA
DYGKRRRLTSE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatggaggggaacagatggatcagttccatcgtaacgaagcgatctcagct
gtggctgatgagggtttcttgggcgaggaagaggaagacgatgattatgaggacctttac
aatgatgtaaatgttggtgagggttttttacagtctatgaggaagaatgaggattcgggt
tttgggaatgaggttgtggaggaaaagaagattgagcaacaacaacaacagcaacaagtt
cctttagtggctcaagaggctgctgtttcgattccgggtgttggtggtggtagtggtgag
ggtactggtggtggagatgttggagctagggttgctgctgggagagttggaggagagggt
tatagtaatagtaataatcaaaatcttggatttagagggggtgagatgggtttgaaggtt
aatgttggatcggggccatcggtgggtggtggaagtgggatgagggttgaattaggtcag
gggtcgagtaagatgaatgattttgaagaacagagtgggaatactagtgttggggttcat
gttattggtcagcagccgcaacagcaacaacaacctcagcagctgcaacaacagcaacca
ccgccgccacaacaagttccgccacctcatgttggtgttgttggaaatgttgggaatatg
gtgggtgatggtatgatgaggcaacctggtgtgggtgttaatgttaatggggttggagga
aacaatgttgttggtggagttggggttggggtaggggttggaggtggaggtggtgggact
attttgtttgttggtgatttgcattggtggacaactgattcggaattggagtctgagtta
tgtaagtatggacaagtgaaggaggttaaatttttcgatgagaaggcaagtgggaagtct
aaagggtattgtcaggttgagttttatgacccagctgctgctacagcctgcaaagagggg
atgaatgggcatttgtttaatggtcgaccttgtcttgttgcatttgcgtccccgttcagt
gtcaagagaatgggagaggctcaagtgaacaggaatcaacagatgactcagactaatgtt
gctcaggctagaaggcctaatgatactggtgttaaacctggtgggaataacattgcaact
ggtgggaattatcaaggtgcagataataatactaatactaataataataatagaggtttc
gggagaggtaattggggaaggggtaatgctcagaatatgggaaataggggtcctgttggt
ccgatgcgaaacaggggtggaggaatgagtggtagaggtataatgggaaatggtggaaat
ggctttgggcagggtcttggtgcaacccctcctttattgcaccctcagtcaatgatgggc
cagggtttcgatccagcttttggtgcccccatgggtagaatgggaagttatggaggcttt
cctggtgccccaacaccgccattttctgggattttgtcttctttccctcctgttggaggt
gttggtttgcctggagttgccccgcacgttaatcctgcatttttcggaaggggaatgccc
atgaatggaatgggaatgatgccaacagctggtgttgatgggcctaatatgggaatgtgg
tctgatcccagcatgggtggatggggtggtggtgaagagcatggtgggggaagagctgcg
gaatctagttatggtgaagaagctgcatctgaccatcaatatggtgaggttagtcatgat
agaggaggaggctggcccaatccaatgaaggaaaaagatagaggttcagagagggactgg
tctgggtcttcggatagaaggtatcgggaggatagggatcaagcttatgagagggatgtg
cctagagaaaaagatacaagtcatgatgactggtctgaaagaagacatcgtgatgataga
gacgctggtcgagagcgggaaagggagcgtgatcgggatcgagaacgttctcgtgatcgc
gaacgtgaaagggaccgtgataggcatagggaagatagggacagatatgctgaccatcat
aggtacagagaccgtgaaactgaacatgatgatgagtgggaaagaggacggtcatcaagg
actcacaacaaaggacgggtatctcaagaggatgatcatcgatcaagatcaagggatgct
gattatgggaagaggcggaggctcacttccgaataa
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