Cannabis sativa (hemp): 115694864
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Entry
115694864 CDS
T08987
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115694864
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115694864
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
115694864
NCBI-ProteinID:
XP_060973878
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Position
6:4317631..4321204
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AA seq
400 aa
AA seq
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MAVRFNLAIIFCSLLLEITFATNPSIFNVKAQPNSDISQALSNAWKQACTSTTPSELLIP
KGTFKLKRVTLEGPCKAPIKINLQATLQAPSDPNGFKDGDGWVTFEHIDRLTLMGGGSFD
GQGKGVWGKHCSQGQYCSKLPICLYLYEYEQNVRFDYVTNSIIEDVISRDSKQFHINVLG
GENITFSGVRVVAPENSPNTDGIHIGRSNRINIIDSNIQTGDDCVSIGDGSKQITVTNVT
CGPGHGFSVGSLGKYKDEKAVEGVIFKGCTMKNTMNGVRIKTWPDSTDGLASNMHFEDID
MENVGNPILIDQEYCPWNNCNKKVPSKIKLKDVTFKNIHGTSTSALAINLICSSGYPCQN
VTIENIDLKYNGPEGPITSKCKNIKPKTIGKQNPSPCNAI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgagatttaatctagcaataatattttgttctttattattggagattactttt
gcaaccaatccttccattttcaatgtcaaggcacaacccaatagtgacattagtcaagct
ctctctaatgcttggaaacaagcatgtacatctactaccccatctgaattactaattcca
aagggaacattcaagttaaaaagagttacattagaaggaccttgtaaggctccaatcaag
attaatcttcaagccacattgcaagccccaagtgaccccaatggtttcaaagatggagat
ggttgggttacttttgaacatattgatagactaactttaatgggtggtggtagttttgat
gggcaaggcaaaggagtttggggaaaacattgctcacaaggacaatattgcagtaaactt
cccatatgtttgtatttgtatgaatatgaacagaatgtaagattcgactacgttactaat
tccataattgaagacgtaatatcacgtgatagtaaacaatttcatatcaatgttttgggt
ggagaaaatattaccttctcaggtgttcgagtagttgctcctgaaaatagtcctaacact
gatggaatccatattggacgttcaaatagaattaacattatcgactcaaatattcaaact
ggcgatgattgtgtttctattggagatggtagtaaacaaataactgttacgaatgttacc
tgtggtcctggacatggttttagcgtcgggagtttaggaaaatataaagatgaaaaagcc
gtagaaggagtgattttcaagggttgtacgatgaaaaatacaatgaatggtgttagaatc
aaaacttggccagattctacagatggtttggcatcaaatatgcattttgaagatattgac
atggaaaatgttggtaatcctattcttatagatcaagaatattgcccttggaataattgc
aacaaaaaggttccatccaaaattaagctgaaagatgttacattcaaaaatattcatggt
acttctacatcagcacttgcaataaacttaatttgtagtagtggatatccatgccaaaat
gttacaattgaaaacattgatttaaaatataatggaccagaaggccctatcacttccaag
tgcaaaaatatcaaaccaaagacaattggcaaacaaaatccttctccatgcaatgctatt
tga
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