Cannabis sativa (hemp): 115695734
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Entry
115695734 CDS
T08987
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115695734
09123 Folding, sorting and degradation
03018 RNA degradation
115695734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115695734
03041 Spliceosome [BR:
csav03041
]
115695734
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115695734
mRNA degradation factors
5'-3' decay
Lsm complex
115695734
Spliceosome [BR:
csav03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115695734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
115695734
NCBI-ProteinID:
XP_030478667
UniProt:
A0A803R803
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Position
6:complement(18323745..18326744)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaggaaagagacagttttggatctcgctaagtttgtggacaaaggtgtacaa
gtaaagctcactggtggtagacaagtaacagggactttaaaaggatatgatcagctgttg
aaccttgttctagacgaagcagtagaatttcttagagatgctgatgatcccttaaagaca
actgatcagaccagaagccttggcttaatagtttgtagaggaactgctgtgatgcttgtg
tctccaactgatggtacagatgagattgccaacccttttatccagccagatggagcatag
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