Cannabis sativa (hemp): 115695916
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Entry
115695916 CDS
T08987
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115695916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115695916
03110 Chaperones and folding catalysts [BR:
csav03110
]
115695916
03029 Mitochondrial biogenesis [BR:
csav03029
]
115695916
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115695916
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115695916
Messenger RNA biogenesis [BR:
csav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115695916
Chaperones and folding catalysts [BR:
csav03110
]
Heat shock proteins
HSP60 / Chaperonin
115695916
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115695916
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115695916
Exosomal proteins of other body fluids (saliva and urine)
115695916
Exosomal proteins of breast cancer cells
115695916
Exosomal proteins of colorectal cancer cells
115695916
Exosomal proteins of bladder cancer cells
115695916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
115695916
NCBI-ProteinID:
XP_030478872
UniProt:
A0AB40E6R6
LinkDB
All DBs
Position
6:complement(74321428..74325966)
Genome browser
AA seq
604 aa
AA seq
DB search
MASTFAAMSSAGSLAAPSGRVLDNKFQKLSSSSSIASCSFAKRQQNVVRRTPSPRISAMA
KELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVE
LEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIE
KTTKALVAELKLMSKEVEDSELADVAAVSAGNNHEVGRMIAEAMSKVGRKGVVTLEEGKS
AENSLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKITNARDLINVLEEAIR
GGYPILIISEDIEQEALATLVVNKLRGALKIAALKAPGFGDRKSQYLDDIAILTGGTVIR
EEVGLSLDKVGNEVLGHASKVVLTKDTTTIVGDGSTQDAVNKRVAQIKNLIEAAEQDYEK
EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRL
ASKVDAIRESLTNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSTDNFKFGYN
AATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacatttgcagccatgtcttctgctggttccttagctgcaccaagtggtaga
gttttggataacaagttccaaaagctttcctcttcttcatccattgcttcatgttctttt
gctaaaagacaacagaatgttgttagaagaaccccttctccaaggatttcagctatggct
aaagagttgcatttcaacaaggatggttcagccatcaagaaattacagactggtgttaac
aagctagctgatcttgttggtgtcactcttggtcctaaaggaaggaatgttgtccttgag
agcaagtatggttcacccaagattgttaatgatggtgtcactgtggccaaagaggttgag
ttagaggacccagttgagaacattggagctaaattagtgagacaggcagctgctaagact
aatgacttggctggtgatggaaccactacatctgttgtccttgctcaaggtcttattgct
gaaggagtaaaggtggtagctgctggtgcaaatcctgttttgatcacaagaggtattgag
aaaaccaccaaagctcttgttgctgaactcaagttaatgtcgaaagaggttgaggacagt
gaactcgcagatgtggctgcagttagtgcaggtaacaaccacgaggtcggaagaatgatc
gccgaagccatgagtaaggttggaaggaagggtgtggtgacccttgaggaagggaaaagt
gctgaaaacagtctatatgttgttgaaggaatgcaattcgaccgaggttacatttcccct
tactttgttaccgacagcgagaagatgaccgtagaatatgaaaactgcaagctgcttctt
gttgacaagaaaattacaaatgcaagggatcttatcaatgttttggaggaagccatcagg
ggtggatacccaattctgattatttcggaagatattgaacaagaagcattggctactctt
gttgtgaacaagcttagaggggcattgaagattgctgcacttaaagctcctggtttcgga
gatcgcaagagccaataccttgacgatattgctattttgaccggaggaactgtgatcaga
gaagaggtgggactcagtttggacaaagtaggcaatgaggtcctcggtcatgcttcgaag
gtggtgctaaccaaggacaccaccacaatcgttggtgatggaagtacccaagatgcagtt
aacaagcgagttgcacagattaagaatcttattgaggctgcagagcaggactacgaaaag
gagaagcttaacgagagaattgcaaaattgtccggcggtgttgctgtgattcaggttggt
gcacaaactgagacagagctcaaagaaaagaagttgagagttgaagatgccctcaatgca
acaaaggccgctgtcgaggaaggtatcgttgttggtggtggatgcaccttgttgagattg
gcatcaaaggtggatgcaattagagagagccttacaaatgacgaggaaaaggttggagct
gatattgtcaagagagctttgagctacccattgaaattgattgccaagaatgctggtgtt
aacggtagcgtggtcagcgagaaggtgctttccaccgacaatttcaaattcggatacaac
gctgccacaggaaagtacgaagatttgatggctgctggaattattgacccaaccaaggtg
gtgaggtgttgtttagagcatgcctcgtcggtggcgaaaacattcttgatgtctgactgt
gtggttgtggagattaaggagcctgaaccagtgcctgcaggcaaccccatggacaattca
ggttatggctattga
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