Cannabis sativa (hemp): 115696239
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Entry
115696239 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115696239 isoform X1
KO
K13210
far upstream element-binding protein
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115696239
03041 Spliceosome [BR:
csav03041
]
115696239
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115696239
Spliceosome [BR:
csav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115696239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
115696239
NCBI-ProteinID:
XP_030479009
LinkDB
All DBs
Position
X:complement(52490295..52496237)
Genome browser
AA seq
764 aa
AA seq
DB search
MAEEEVAAASVSPASLDHKRKLEELEPEAPEQAELNSDEQANSNAEHDAPDGEASEETEL
KRPRLDDKPDVSVVAVSENGHLEEKVDEPVKDIEEVSALEGGLEETQPQSEEGTRNETDK
QHPSTDSHQLSGQNANGAQETSKDETEAPSSEDQQQQEGEEASAEPHQLTSVDEQQLSSD
NETITRRMEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPYAATRPVEVIGTL
DNINKAEKLINAVIAEADAGGSPSLVARGLANSQAASAPEQIQIQVPNEKVGLIIGRGGE
TIKGLQTRSGARIQVLIPQHLPEGDESKERTVRVTGDKRQIEIAREMIKDVMNQTVRPSS
LSSGFNQQGYRPRGPPGPQWGPRGHMAHPSSFDYQQRGPYSSHNPQYPTQYGGYPQQMGP
RGGFNSGWEQRPPPGLQGHGHNGGYDYYSGQKGHLSDSAHTASISLHAPGPSPNAAIGPP
LSQANYNYGQPQGPDYGQQAPYSQSAHSQQNYGHGYDDHAPAQHPYGSSQPLYPQSGAPA
GYGQQQQYGKPSYGVQSQGPPPQSYGPPRPSQPGDVPFQGTASAQSYGQSVPPQQPYPYA
SSGQAYPAYGSAPPAAADGYSQPPPASASGYPQQGGQLAASYGQSGSQQTGYAQVAPTAA
YGQYPSAQQGYPEQSAPNSAGYGYQGHQDPGYGTAAPASTYGTPNAQGGYGAQPAQAQQA
YDQSVQQSGAYGVQPSTSVTYGKTVSPQPGYAQYDSTQMYAAPH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaggaagttgcagctgcctcggtcagtcctgcatcgttggatcataaacgg
aagctcgaagagctggaacccgaagctccggaacaggccgagctgaactccgacgaacag
gccaattcaaatgccgagcacgacgcacctgatggcgaggcatccgaagaaacggaactg
aagcggccgcggcttgatgacaaacctgatgtttcagttgtggcagtaagtgaaaacggg
cacctagaagagaaggtagatgaacctgtgaaggatattgaagaggtgtcggccttggaa
ggtggcctagaggaaactcaacctcaatcggaggaaggtactcgaaatgaaactgataag
cagcatccatctacggacagtcatcagctgtctggtcaaaatgcaaatggagctcaggaa
acctcgaaagatgaaactgaagcaccctcttcagaggaccagcagcagcaggagggagag
gaggcttctgctgaaccccatcaacttacatctgttgatgagcaacaactttcatctgat
aacgaaacaattacacgcagaatggaggtccctaataacaaggttggggttcttattgga
aaagctggggacactataaggtaccttcaatacaattcaggagcaaaaattcagattact
agagatgcggatgctgatccatatgctgcaacaaggcctgtggaggtcattggtactttg
gacaacataaacaaggctgagaagcttatcaatgcggtcattgcagaggctgatgcaggg
ggttctccttcccttgtggcaagaggccttgctaattcacaggccgcttcagccccagag
caaattcagatacaagttcctaatgagaaggttggtttaatcatcggcagaggaggggag
accattaaaggtctccagacaagatcaggagcacgcatccaggtattgataccccaacat
cttccagaaggtgatgagtccaaggaaagaactgtacgagtgactggtgataaaaggcaa
attgaaattgctagagaaatgataaaggatgtcatgaatcagactgtgaggccatcttct
ctctcaagtggttttaatcaacagggctatcggcctcgtggacctcctggaccacagtgg
ggtcctcgaggtcatatggcccacccatcctcgtttgattatcagcaacgagggccatat
tcatctcacaacccacagtatccaactcaatatggtggttatcctcaacaaatgggtcca
agaggtggttttaattctggctgggagcaaaggcctccccctggcttgcaggggcacggg
cataatggcggttatgattactacagtggacaaaaaggccatttatcagattctgcacac
actgcttccatttctctacatgctcctggcccatctccaaatgctgcaatcgggccacct
ttatcacaagcaaactacaattatggacagcctcagggcccagattatgggcaacaggca
ccttattctcagtcagcacactcccaacagaactatggtcatggctatgacgatcatgct
ccagcacagcatccctatggtagttctcagccactgtatcctcaaagtggtgctccagca
ggttatggtcagcaacagcagtatggtaaaccatcttatggggtgcaatcccagggtcca
cctccccaatcttatggtcctcctaggcctagtcagcccggtgatgtgccttttcaaggt
acagcttctgcgcaatcgtacggtcagagtgtgccacctcaacagccatatccatatgct
tcaagtgggcaggcatatcctgcttacggctctgcccctcctgctgctgctgatgggtac
agccagccaccacctgcgtctgcctcaggctatccacagcaaggaggccaactggctgca
agttatggccagtctggttcgcagcaaactggctatgcacaggtggctcctactgcagcg
tatgggcagtacccttctgctcagcaaggttatcctgagcagtctgctccaaattctgct
ggttatgggtatcaaggtcaccaagatcctggatatgggactgctgcacctgcatcaact
tatggcacaccaaatgcacaagggggttatggtgctcaacctgctcaggcccagcaagct
tatgatcaatcagtccaacagtctggtgcttatggtgtccaaccaagcacttcagttact
tatggtaaaacagtatcacctcagcctggttatgctcaatatgattcgactcagatgtat
gcagcacctcattaa
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