Cannabis sativa (hemp): 115696486
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Entry
115696486 CDS
T08987
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115696486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115696486
Spliceosome [BR:
csav03041
]
Complex A
U1 snRNP components
U1 related factors
115696486
Complex B
115696486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
115696486
NCBI-ProteinID:
XP_030479247
LinkDB
All DBs
Position
X:complement(50307452..50318866)
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AA seq
1000 aa
AA seq
DB search
MENSSQSSGPQFRPMIPNQQGQPFLPSASQQFQPVGQGMPHPNLGMSGVQSQPMHFSQPM
QPYPPRPGQGGHPMPSSQGLPMSYIQTRPIAPGPPQTQQPGPPFNNQMPGGAGMPFSSPY
SFAPSFVQPQNNANSMPQFQSMPQMQAPIPGQPWLPSGSQSAPVATLVQQTGHQPSAASS
TDTAMNSLTQPSLSDWQEHSSTDGRRYYYNRRTKQSVWDKPLELMTPLERADASTVWKEY
SSPDGRKYYYNKVTKQSKWTIPEELKLARELAEKEGSHGSQLETSIISHGSAAAASAETP
PPVTPVALTTSFALTGIALSPVAVTPVASLPNSSVDVSGSSATPTSQSTVTGSVGVHPPM
VTAVSSTPVISRSTGVSSFLTNANATPMSTYENQASQDIASSVDGASMQDIEDAKKGMAV
AGKINVTPMEEKLVDEEPLVYASKLEAKNAFKSLLESTNVQSDWTWEQTMREIVNDKRYG
ALRTLGERKQAFNEYLGQRKKLEAEEKRTRQKKAREEFTKMLEESKELTSSTRWSKAVTM
FENDERFKAVDRARDKEDLFESYIVELERKEKEQAAEEHRQNVAEYRRFLESCEFIKVNS
QWRKVQDRLEDDERYLCLEKLDRLLIFQDYIRDLEKEEEEQKKIQKDHLRRVERKNRDEF
RKLMEEHIVTGILTARTYWRDYCLKVKDLLQYQAIASNTSGSTPKDLFEDVIDELEKHYH
EDKARVKDVLKLGKVSFAATWTFDDFKEAVLEEIGSPLVSDINLKLVFEDLIDRAKEKEE
KETKKRQRLADDFTKLLYTFKEITSTSTWEDCKQLFEESQEYRSIGEESLTREIFEEYIT
HLLEKAKEKERKRDEEKAKKEKDKDDKEKRKEKERKEKDRDKEKSKERSKKDDTDSENMD
ISDSHGHKEEKKKEKDKDRKHRKRHLSGTDEMGSDKDEKDDSKKRKHSSDRKKSRKHAHS
PETDSESRHKKHRREHREARRNGGHEELEDGELGEDGEIP
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagttcacagtcttctggtccacagtttcgaccaatgatcccaaatcagcaa
ggacaaccatttcttccatcagcttcgcaacaatttcagccagttggacagggtatgccg
catcctaacttagggatgtctggtgtacaaagtcagccaatgcatttttctcagcctatg
caaccgtaccctcctagaccaggtcaaggtggtcatccgatgccttcatcacagggttta
ccaatgtcgtatattcaaacaaggcctattgcacctggaccaccacagactcagcaacct
ggtcctcctttcaataatcagatgcctggtggtgctgggatgcctttttcatcaccatat
tcttttgcaccttctttcgtccaaccacaaaataatgccaactcaatgccacagttccag
tcaatgcctcaaatgcaagcacccattccaggacaaccttggttgccctctggaagccag
agtgctccagttgctaccttagtccagcagactggccatcaaccttcggctgcttcttcc
acagatactgcaatgaatagccttacacagccttccttatctgattggcaagaacattca
tctactgatggaaggaggtattattacaacagaagaacaaaacagtctgtttgggataag
cctttggaattgatgacaccgttggagagagctgatgcatcaactgtttggaaggaatat
agttctccagatggaagaaagtattattacaacaaggttacaaagcaatctaagtggaca
ataccagaggaactaaagctggctcgtgagctagctgagaaagaaggtagtcatggatct
cagttggaaactagtataatctctcatggttctgcggctgcggcttcagctgaaacaccc
ccgccagttactccggtggccttaactacctcttttgcactaactgggattgcattgagc
ccagttgctgttacacctgttgcttccttgcctaattcttcagtggatgtttctggatct
tcagccacccctacttcacagtctactgtaacaggtagtgttggagttcatcctcctatg
gtaactgcggtttcctcgactcctgtaatttcaagaagtacaggagtttcatcttttttg
accaatgccaatgctacaccaatgagcacatatgagaatcaagcatcacaagatattgca
agttcagtggatggagcttctatgcaggatattgaggatgcaaaaaaaggcatggcagtt
gctggaaaaatcaatgtaactcctatggaggaaaaattagttgatgaagaacctttggtt
tatgccagtaagctggaagcaaaaaatgcattcaaatcacttctggagtctacaaatgtt
cagtctgactggacttgggagcagacaatgagggaaattgtcaatgacaaaagatatggt
gctctaagaactcttggtgagcggaagcaagcgtttaatgagtacttgggtcaaagaaaa
aagcttgaggctgaagagaagcgtacaaggcagaaaaaagccagggaagaattcacaaaa
atgttagaggagtctaaagaactcacgtcatcgaccagatggagcaaagctgtcactatg
tttgaaaatgatgaacgcttcaaggctgttgaccgagctagagacaaagaagatcttttt
gaaagctatattgttgaacttgaacggaaggaaaaagaacaggctgctgaagagcaccgg
cagaatgtagcagagtacagaagatttttagaatcttgtgaatttatcaaggtgaatagc
cagtggcgaaaagttcaagatcggttagaggatgatgagagatatttatgtcttgagaag
cttgatcgcttgctcattttccaggactacatccgtgacttggaaaaggaggaagaggag
caaaagaagattcaaaaggaccatctgagacgggttgaaagaaagaaccgcgatgagttt
cgcaaactcatggaagagcatattgttactggaattcttactgctagaacttattggcga
gattactgtttaaaggttaaggatctgttacagtatcaagccattgcatcaaatacctct
ggctcgacaccaaaggacttgtttgaggatgttattgatgaattagagaaacattatcac
gaagataaagcccgggtgaaagatgtactgaagctggggaaggtttcgtttgctgccact
tggacatttgatgacttcaaggaagcagtcttggaagagattggctcccctctggtgtca
gacatcaacttaaagcttgtatttgaggatttaatagatagagctaaggagaaagaggag
aaagaaactaaaaagcgtcaacgacttgctgatgatttcactaagctattatacacattt
aaggaaataacctcaacttctacttgggaggattgtaaacaactttttgaagagagccag
gaatacagatcaattggtgaagagagcttgacaagggaaatttttgaggaatatattaca
caccttctggagaaggctaaagagaaagaacgcaagcgtgacgaagaaaaagccaaaaaa
gagaaagacaaggatgacaaagagaaaaggaaggagaaggagcgaaaagagaaagataga
gataaggagaaaagcaaagaacggtctaagaaggatgatacagatagtgagaatatggac
attagtgatagtcatggtcataaagaggagaagaaaaaggaaaaagacaaagacagaaaa
caccggaagcggcatctaagtggtacagatgagatggggtctgataaggatgagaaggat
gattctaagaaacgtaaacatagcagtgaccgcaaaaaatcaagaaaacatgcacattca
cctgaaacagacagtgagagtcggcataaaaagcataggagagagcatagggaggcccgt
agaaatggtggacacgaagagctagaagacggagagcttggggaggacggagaaatccca
tag
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