Cannabis sativa (hemp): 115696531
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Entry
115696531 CDS
T08987
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115696531
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115696531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_GCN1
TOR1L1_N
HEAT_ECM29
HEAT_2
TPR_Trm732_C
ResIII
HEAT_GCN1_C
UTP20
mTOR_dom
CLASP_N
Motif
Other DBs
NCBI-GeneID:
115696531
NCBI-ProteinID:
XP_060973663
LinkDB
All DBs
Position
6:75495865..75509690
Genome browser
AA seq
2076 aa
AA seq
DB search
MAAQQSSRLHRLLTLLDTGSSQSTRFTAARQIGEIAKSHPQDLVSLLKKVCQYLRSKNWD
TRVAAARAIGAIAENVNHTSLPQLLSSFKSKLSDFGMPGISEDLLALPDFHSNVAGISFR
SFNINKVLEFGALLASGGQEYDIAYDSLKNPRERLARQKQNLRRRLGLEVCEQFMDVNDM
IRDEDLIMQSSHGNGINQRVYVPHNIQRLVADMVPNIMSRRPSPRERNLLKRKAKISSKD
QMKGWSEDGDSRVLGVQNVTVPKVLSADSLSSSKASMDVNDDEDGSDHDKDGLWPFHSFV
EQLLLDMFDPVWEVRHGSVMALREILTHQGASAGVFMPDLSLDGAQFFQLEDEFVSHRMK
RERAIDLNIQGPTDEFEPNMKMPKFTDVSSPWVDTMSVANIDCNTDINIKVEDDSICDLP
AEPVTEFSNVSTVKVESDSHLDITLHSKEEDITLYSNKEDTAQYSNKEETTLYSNKEVTE
TALFEDSSSIKETDVMRNISENSELMNWIKLARHSWLKNCQFLQECAIRFLCVLSLDRFG
DYVSDQVVAPVRETCAQALGVVFKYMHPTLLHETLTILLEMQVNFIPEWEIRHGSLLGIK
YLVAVRKEMLHELLGRVLPACKAGLEDPDDDVRAVAADALIPTAAAIVSLQGQTLNSIVM
LLWDILLDLDDLSPSTSSVMNLLAEIYSQDEIFPKMLGRSKDSQGFDLNEVGCIDDTGGV
NLQENPFMLATLAPRLWPFMRHSITSVRYSAIRTLERLLEAGYKRNISDSGSSSFWPSFI
LGDTLRIVFQNLLLDSNDEILQCSERVWRLLVQSPKEDLEIAARSYMSSWIELASTPYGS
VLDATKMFWPVALPRKSHFRAAAKMRAVNLENEFYRNISLESTNGAIPHERMGEASINPV
KIVVGTDVEMSVTHTRVVTATALGIFASMLEEGSTQHVVDPLSNALASLSGVQRQVASMI
LISWFKEIKVRGSNENQGTMSRFPSHLRNWLLDLLACSDPTFPTKESLLPYLELSRTYSK
MRGEASQLLRTMESSGIFDNLSAITKPDCETLSADDAISFASNVPALCNDNIGSKSVPHL
EDMESAKQRLLTTSGYLKCVQSNLHVSVSALVAAAVVWMSELPARLNPIILPLMASIRRE
QEEKLQEKAAEALAELIYYCVSRKPSPNDKLIKNVCTLTCLDPCETPQAAVIGSKGIIDD
QDLLSFGTVTNKQKTKGQMIAGGEDRSKVEGFISRRGSELALKHLCEKFGASLFDKLPKL
WDCLAEVLNPTTNDSSLTPNENQVTQIIDSVQDPQILINNIQVVRSIVPLLNEALKPKLL
TLLPCLFYCIRHPHIAVRLASSRCITSMAKSMTVHAMGAIVENAIQMLGDNSSVSARQGA
GMLISLLVQGLGQELVSYSPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPP
PVGLSDSFSRSSEDAQFLEQLLDNSNIDDYKLSTDLKVTLRRYQQEGINWLAFLKRFKLH
GILCDDMGLGKTLQASAIVASDIVECRASNNNESCSPSLIICPSTLVGHWAFEIEKYIDV
SVISTLQYVGSAQDRVSLRDHFDKHNVIITSYDVIRKDIDHLGKLLWNYCILDEGHIIKN
AKSKITNAVKQLKAQHRLILSGTPIQNNVMDLWSLFDFLMPGFLGTERQFQATYGKPLVA
ARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKL
YEQFSGSHVKHEISSIVKSNESGDTGEGSSVSTKASSHVFQALQYLLKLCSHPLLVLGDK
IPDSIECLFSEQHASSDTISELHRPCHSPKLVALQEILEECGIGVDASNSDASVGVGQHR
VLIFAQHKAFLDIIERDLFQTYMKSVTYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLLTT
HVGGLGLNLTSADTLVFMEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMS
LQKFKVSVANAVINSENASMKTMNTDQLLDLFASAETSKKGTSVLKQTDNNFDGDAKLPG
SKKGLKAILGGLEELWDHSQYTEEYNLNQFLSKLSG
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaacaatcttctcgtcttcatcgtctgctcactcttttggacactggttcg
tcacagtccacaaggttcactgctgctcgtcagattggggaaatagccaaatcgcatcct
caagacttggtatctcttttgaaaaaggtttgtcagtatcttcgtagcaaaaactgggat
acgagggttgctgctgctcgtgctattggggctatagctgagaatgttaatcacacatct
ttgcctcaacttctttcttcattcaaatcaaaattgtctgactttggaatgcctggtatt
tctgaagatttgcttgcattgccagattttcattccaacgttgctggcatctctttcagg
agctttaatatcaacaaagtgctcgagtttggcgctttattggcatctggaggacaggaa
tatgacattgcgtatgatagtttgaagaacccaagggaaaggttggctcgtcagaagcaa
aatcttcggcgacgtttaggcttggaagtatgtgagcagttcatggatgtaaatgatatg
ataagagatgaagaccttattatgcagagctctcatggaaatggaataaatcagagagtt
tatgtaccacataatattcagcgattagttgcagatatggttccaaacatcatgtcgaga
aggcctagtccaagagaaaggaatcttctcaaacgaaaagcaaaaattagctcaaaagac
caaatgaaaggttggtctgaggatggcgactcaagggtgttgggtgtacagaatgtgact
gtgccaaaggtcctaagtgccgattccttaagttctagtaaggcctctatggatgttaat
gatgatgaagacggctcggaccatgacaaagatggattgtggcctttccatagttttgtc
gagcaacttctacttgatatgtttgatcctgtatgggaagttcggcatggaagtgtgatg
gctctaagggaaattttaactcaccaaggagcttctgctggagtatttatgcctgacttg
agcttggatggtgcacagttttttcaactagaagatgaatttgtatcacatagaatgaag
agagaaagagcgattgatttgaatatacaaggtccaactgatgagtttgaaccgaacatg
aaaatgccaaagtttactgatgtgtcgtctccatgggtggatacaatgtctgttgccaac
atagattgtaacactgacatcaatataaaggttgaagatgatagtatctgtgatctgccc
gctgagcccgttactgagttctctaatgttagcactgttaaggtggaatcagattctcac
cttgatattacattgcattcgaaggaagaagatattacattgtattcaaataaagaagat
actgcacagtattcgaataaagaagagactacactgtattcaaataaagaagtaactgaa
acggccttgttcgaggactcctccagcattaaggaaacagatgtgatgagaaacatatct
gaaaattctgagctgatgaactggattaaattggctaggcattcatggcttaagaactgc
caatttcttcaagaatgtgcaatccgtttcctttgtgttttatcactagaccgttttgga
gattatgtatctgatcaggttgttgcaccagtacgggaaacctgtgctcaggcattaggt
gttgttttcaagtacatgcatcccactctactccatgaaacattgactatcttgctggag
atgcaggtaaatttcataccagaatgggagattcgccatggaagtctgttgggtatcaag
tatttggtagctgtaaggaaggagatgcttcatgaattgcttggacgtgttctccccgca
tgtaaagctgggctggaggaccctgatgatgatgttcgagctgtggcagctgatgctttg
attccaacagccgctgcaattgttagcttacagggtcagacattgaattccatagtgatg
ttgctatgggatatattacttgatttggatgatttgagtccatctacgagcagtgtgatg
aatttgttagcagaaatttattcccaggatgaaatatttcctaaaatgttgggaaggtcg
aaagatagccaaggatttgatctaaatgaggtaggctgcattgatgatactggaggagtg
aatttgcaggagaatccttttatgttagcaacattggctccacgtttatggccatttatg
agacatagtatcacatcggtccgttattcagctattcgcactttggagcgattgcttgaa
gctggatataaaaggaacatttctgactctggtagctcttcattttggccttcatttata
ctcggtgatacccttcgaattgtcttccagaatttgctgttggattcaaatgatgaaatt
ttgcaatgttctgagagagtttggaggctccttgttcagtctccgaaggaggacctggaa
attgctgcaaggtcgtacatgtcttcttggattgagcttgcaagtactccatatggttcg
gtattagatgctacaaaaatgttttggccggttgctcttccacggaaaagtcattttaga
gcagcagctaaaatgagagctgtgaatcttgaaaatgagttttatagaaatatctcctta
gaatctacaaatggagctattccacatgagagaatgggagaggcttccattaatcctgtt
aagattgttgttggtactgatgtggaaatgtcagtgactcatacccgagtggtcacagca
acagcattgggcatttttgcgtctatgttggaagaagggtctacacaacatgttgttgat
ccactatcgaatgcactggcctctctttctggtgtccagcggcaggtggcatctatgatt
ctaatttcttggttcaaagagataaaagtcaggggttcaaatgaaaatcaaggaactatg
tctcgatttcccagtcatcttagaaattggctgttggacttgttggcatgctccgatcct
acattccctactaaagaatcacttctaccttatttagagctttcaagaacctattctaag
atgcgtggtgaggctagtcagttattacgtactatggaatcatcgggtatcttcgataac
ctgtcagcaattacaaagcctgattgtgaaactttgagtgcggatgatgccataagtttt
gcatccaatgttccagccttgtgtaatgataatatcgggagtaaatctgttccacatctt
gaggatatggagtcagcaaagcaacgacttcttacaacttcaggatatttgaaatgtgtt
cagagtaatctccatgtttcagtctctgccctcgttgctgcggcagttgtttggatgtca
gagcttcccgcgcggcttaatccaattatcttgcctctaatggcttcaatcagaagagaa
caggaggagaaactgcaagagaaggctgctgaagcgcttgcagaacttatttattattgt
gtttcgcgtaagcctagcccaaatgataaattaattaagaatgtatgtactctaacatgc
ttggatccttgcgagacacctcaagctgcagttattggctccaagggaattattgacgat
caagatcttctttcatttgggaccgtgactaataagcagaaaacgaagggtcagatgatt
gctggtggtgaagaccggtcaaaggttgagggcttcattagcagacgagggtctgaactt
gcattgaagcatctctgtgagaagtttggtgcttctttatttgataagcttcctaaattg
tgggattgcctggcagaagttcttaaccctaccactaacgactcctctttaactccaaat
gagaatcaagttacacaaattattgactctgttcaggatcctcaaattttgataaacaac
atccaggttgtgcgttctattgttcctttgttaaacgaggcacttaaaccgaaacttctc
acccttcttccatgccttttctattgcattcgtcatccccacatagctgttagattagct
tcttctcggtgcattacttcaatggccaagtcaatgacagtacatgcaatgggagctata
gttgaaaatgctattcagatgttaggagataattcttctgttagtgcaagacaaggtgca
ggcatgctgatcagtttgctcgttcagggattgggtcaggagcttgtttcctattctcca
ttgttagttgttccacttttaaggtgcatgagtgattgtgatcagtctgtgagacaaagt
gtgacacatagttttgccgcccttgtacctcttcttccattggcaagaggccttccccca
cctgttggactaagcgatagtttctctaggagttccgaagatgcacagtttctggagcaa
ctacttgacaactccaatatcgatgattacaaactctctactgatttgaaagtaacacta
aggaggtatcaacaagaaggtataaattggctggctttcttaaaacgtttcaagcttcat
ggaattttatgtgatgatatggggcttggcaaaacacttcaagcatcagctattgtggct
tctgacatagttgagtgccgtgcttcaaataacaatgagagctgttcaccatctctgatt
atttgcccgtcaaccctggtcggacactgggcctttgagatagagaagtatatagatgtt
tcggtcatatctactcttcagtatgttggttctgctcaagaccgcgtttctcttagagat
cattttgataagcataatgtaataataacatcatatgatgtgattcgtaaagacattgat
catcttgggaagcttctatggaattattgtatcttagatgaaggacatatcataaagaat
gcgaagtctaaaattacaaatgcagtgaaacagttaaaagctcagcaccgattgattttg
agtggaacaccaattcagaataacgtcatggacttgtggtccctttttgattttttaatg
ccgggcttccttggaactgagagacagttccaagccacttacgggaaaccattagtagca
gccagagatcctaaatgttctgccaaggatgctgaagcgggggcactagctatggaagca
ttgcacaaacaggtcatgcctttcctccttcgacgaacaaaggatgaagttttgtctgat
cttccagagaaaattattcaagacagatactgcgacctgagccctgtacaattaaaactt
tacgagcaattttccggctcacatgtaaaacacgaaatctcaagtattgtgaaatcgaat
gagtcaggagatacaggagaaggaagcagtgtatcaaccaaagcatcttcacatgttttc
caggcacttcaatatttgttaaaactttgtagtcatccattgcttgttcttggagataag
atccccgattcgattgaatgccttttttctgagcaacatgctagttccgacacaatttcg
gaattgcatagaccttgccactctcccaaactcgttgcacttcaggagatactggaagag
tgtgggataggcgttgatgcatctaattctgatgcttcagtgggtgtcggtcagcataga
gtcttaatatttgctcagcataaggcctttctggacattatagaaagagacttgtttcag
acctacatgaaaagtgtaacttacttgaggttggatggatcggttgaaccagaaaaacgt
ttcgacattgttaaagctttcaattcagaccctactattgatgtcttgctattgactaca
cacgtcggtggcctcgggctgaacctgacatcggcggacacacttgttttcatggagcac
gactggaatccaatgcgagatcttcaggcaatggatagagcacacagattaggtcagaaa
aaagtagtgaacgttcatcgtctgataatgcgcggaaccttggaagagaaagtcatgagc
ttgcaaaagttcaaagtttcggttgctaatgcagtgattaattcagaaaacgccagcatg
aaaacaatgaacaccgatcagttactcgatctctttgcatcagcagagacttctaagaag
ggaacttctgtattgaagcaaacggataataatttcgatggagatgcgaagttaccggga
agcaagaagggtttaaaagccattcttggtgggctagaagagctatgggatcactcacag
tacaccgaagaatacaatctaaatcaattcttgtcaaagcttagtggctaa
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integrated database retrieval system
