KEGG   Cannabis sativa (hemp): 115697032
Entry
115697032         CDS       T08987                                 
Name
(RefSeq) transcription factor bHLH140
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115697032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csav03400]
    115697032
Enzymes [BR:csav01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     115697032
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     115697032
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     115697032
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115697032
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     115697032
SSDB
Motif
Pfam: DcpS_C AAA_33 zf-C2HE Macro HIT AAA_18 AAA AAA_16 AAA_22 nSTAND3 AAA_19 CPT AAA_17 AAA_5 DNA_ligase_A_N ATP_bind_1 AAA_24 MeaB POT1 PPV_E1_C AAA_28 AAA_29 RNA_helicase
Other DBs
NCBI-GeneID: 115697032
NCBI-ProteinID: XP_030479789
LinkDB
Position
7:4465386..4470089
AA seq 759 aa
MADMDIDTCSKPEGEEQQGKGNAMVVILIGPPGSGKSTFCEEVMRFSTRPWVRICQDNIA
NGKAGSKAQCIKSATAALNDGKSVFIDRCNLDREQRAEFVKLGSPKIDIHAVVLDLPARL
CISRSVKRTGHEGNLQGGRAAAVVNKMLQNKEFPKLTEGFTRITFCQNETEVQDAINTYS
ALGPLESLSQGVFGQKKSDAKVQLGIMKFFKKSGTAESGNVGSVATSDQNSASLEKTEDK
GSCSKAAVSFSDNAVTEINEHKDQMKGMVKDASASLGDAPTLAFPSISTSDFQFNHEKAS
DIIIEKVEEFLDKIGNARLVFVDLTHRSKILTLVKEKASKRNIDPNKFFTFVGDITQLYS
QGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGAALEVATKEQANTLLPGRALVVSLPSN
SPLFGKEGVTHVIHVLGPNMNPQRPNCLKNDYATGCKILRDAYTSLFEGFVSIVRKLPPG
SNDNLGSKQSEIQIRNETASKNSEQKFRRDDDDHESDRTKKYKGSHVETKISNSSVGKTI
QSGEKFDRTATKAWGSWAQALYHIAKQPEKHKEVVLEMSDDIVVLNDLYPKARKHLLVLT
RLEGLEQLADAREEHLPLLRKMHDVGLKWTETLLQEDTSLIFRIGYHSAPSMRQLHLHVI
SQDFNSKHLKKKQHWNSFTTAFFRDSVDVMEEVSSHGKAKLEDDEKLLSMELRCHRCRSA
HPNIPRLKSHITNCNAPFPANLLQKGRLVSAPNNTIISP
NT seq 2280 nt   +upstreamnt  +downstreamnt
atggcggacatggatatcgatacttgttcaaaaccagaaggcgaagaacagcaaggcaaa
gggaatgctatggtggtaatcttgattggtccaccgggcagcgggaaaagtactttctgt
gaagaagtcatgcgcttctccactcgaccatgggttcgcatttgccaggacaatattgca
aatggtaaagctgggagtaaagctcaatgcataaagagtgcaactgctgctctgaatgat
ggaaaaagtgtgtttattgacagatgcaacttggacagggaacagcgtgcagaatttgtt
aagcttggtagccccaaaatcgacatacatgctgtcgtacttgatctgcctgctcgtctt
tgtatatctagatctgtcaaacgaacaggccatgagggaaacttgcaaggtggaagagct
gccgctgttgtaaacaaaatgctgcaaaataaagaatttcctaagcttactgaaggattt
actagaataactttctgccaaaatgagactgaggttcaagatgccattaatacatacagt
gcacttggtcctttggaatctctgtctcaaggtgtgtttggtcagaagaagtcagatgct
aaagttcagctcggtataatgaagttctttaaaaaatcaggaacagctgaatctggtaat
gttggatctgttgcaactagtgatcagaattctgcttctctggaaaaaacagaggataaa
ggttcctgctccaaagcagctgtatcgttttcagataatgctgttacagagataaatgaa
cataaagaccaaatgaaaggcatggttaaggatgcttctgcttctctgggtgatgctccc
acattggcatttccatctatttccacatcagatttccaattcaatcacgagaaggcatct
gacattattattgagaaagtcgaggaatttctggataagattggaaatgctagacttgtc
tttgtagacttgactcatagatcaaagattttgacgttggttaaggaaaaagcttcaaag
agaaacattgaccccaacaagttctttacttttgtaggagatattactcaactttattca
caaggtggtctacgctgcaacgtaatagctaatgctgccaattggcgactgaaaccagga
ggtggaggtgtgaatgctgcaattttcagtgctgcaggtgcagccctagaggttgcaact
aaagaacaggcaaacactcttcttcctgggagggctttagtagtttctctcccttcaaat
tctcccttgtttggtaaggaaggagtaacccatgtcatacatgttcttggaccaaatatg
aacccacagagaccaaactgtttgaaaaatgactatgctaccggctgcaaaattctccgc
gatgcttacacatcgctatttgaaggttttgtgtcaatagtaaggaagttacccccggga
agtaatgataatcttggttcaaagcagtcggagatacaaatacgcaatgaaactgcctca
aagaatagtgagcaaaaatttagaagagatgatgatgaccatgaatctgataggactaaa
aagtacaagggatctcatgttgaaactaagatttctaattctagtgttggaaagacaatt
cagagtggtgaaaagtttgatagaacagcaactaaagcctggggatcatgggcacaggct
ctttaccacattgccaagcaaccagagaagcataaggaagttgtgctagagatgtctgat
gatattgttgtactaaatgatctttacccaaaggcacggaagcatcttttggtgttgaca
cgattggaaggtcttgagcaactagctgatgcccgtgaggagcatctcccattgttgaga
aaaatgcacgatgttggtttgaagtggactgaaacattactgcaagaagatacatctttg
atttttcgcattggctatcactcggctccatcaatgcgacaacttcacctacacgttatc
agccaagatttcaactcaaaacatctgaagaagaagcaacactggaattcattcaccact
gctttcttccgtgattctgtggatgtaatggaggaagtcagcagccacggaaaagcaaaa
ctagaagatgatgaaaagctgttgtctatggagttacgctgccaccgttgtagaagtgcc
caccccaacatcccccgcttaaagtcacacatcactaactgcaacgcaccatttcctgcc
aaccttcttcaaaaaggccgtctagtgagcgctccaaacaacaccatcatcagtccataa

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