Cannabis sativa (hemp): 115697254
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Entry
115697254 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115697254 isoform X2
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115697254
Enzymes [BR:
csav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
115697254
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
115697254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
115697254
NCBI-ProteinID:
XP_030480045
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Position
7:complement(50000742..50005728)
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AA seq
624 aa
AA seq
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MEDIEDLLVGSISGAPPGFRLPLTSVGLNPKKAKKKPPLNYANTNGFAPKIPGTQTIYIK
TFGCSHNQSDSEYMAGQLSAFGYSLSENPDEADLWLINTCTVKSPSQSAMDTIITKGRSS
KKPLVVAGCVPQGSRDLKELEGVSVVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDL
PKVRKNSFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKSVVADGVKEIWLS
SEDTGAYGRDIGVNLPVLLKAIVAELPFDASTMLRIGMTNPPFILEHLKEIADVLCHPCV
YSFLHVPVQSGSDAVLSAMNREYTSSEFRIVVDTLTELVPGMHIATDIICGFPGETDEDF
AETVSLINQYKFPQVHISQFYPRPGTPAAKMKKVPSTVVKKRSRELTTLFESFTPYSGME
GRVERIWITDIATDRVHLVGHTKGYIQVLVVAPQSMLGTSAIVKITSVGRWSVFGEVIET
IKGRSSKTSSNMGTLSIDDKCSPCSNACGDGCESRVQEEACDCGAGGCCTGTTIKHSVAS
NNSISRKDGSSINLVGWLLRKRKNHVQKQMESEITTEFDNKQEQAEQSIASWNAMDKVLL
GGMLVSFLTILVLLIHLGFRTSSN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattgaagatttgttagttggaagcattagcggagctcctcctggatttcgg
ttgccactgacttcagttggattgaacccaaagaaggcaaagaagaaacctcctctcaat
tatgctaacaccaatggttttgcccctaaaattcctggcactcagacaatttacatcaaa
accttcgggtgctctcacaaccagagtgacagtgagtatatggctggtcagctttcagca
tttggttattcattgagtgaaaatcccgatgaagccgatctatggcttataaacacttgt
acagttaaatctcctagtcaatctgcaatggacactataataactaagggaagaagttcc
aaaaaaccgcttgtggtggctggctgtgttcctcaaggaagcagagatctaaaagaattg
gaaggagtcagtgtagtaggagtccagcaaattgacagggtggttgaagttgttgaagag
acactgaaaggtcatgaggtgcgacttttgaaccgcaaaactttgcctgcacttgacctt
ccaaaggtaagaaagaactcatttgttgagattcttccaattaatgttggttgtttaggg
gcctgcacttactgcaaaacaaagcatgctcgtggtcacttgggtagttatactgttgat
agccttgtaggacgtgtaaaatctgttgtagctgatggtgttaaagagatttggttgagc
agtgaagatactggagcttatggtcgagacattggggtcaatctcccagttttgttgaag
gcaattgttgctgaacttccttttgatgcaagcacaatgcttcgcattgggatgacaaat
cctccttttattctagagcacttgaaagagatagcagatgttttgtgccacccatgtgtc
tactccttcttgcatgtacctgttcaatctggtagtgatgcagtcttgagtgctatgaat
cgagaatatacttcgagtgagttcaggattgtggttgataccttgactgagcttgtgcct
gggatgcatattgcaactgatatcatatgtggatttcctggtgaaacagatgaagatttt
gctgaaactgttagccttattaatcaatacaagttccctcaagttcatatatcacaattc
tatcctcgaccagggacgcctgctgcaaagatgaaaaaggttcctagtactgtagtgaag
aaacggagccgtgagttgactacactctttgaatccttcacaccttatagtggaatggaa
gggagagtggaaaggatatggataacagatattgcgaccgatagagttcacttggttggc
cataccaagggatacatccaggtgcttgtagttgccccacagagtatgctaggaacttca
gccattgtgaaaataacatctgtaggaaggtggtctgttttcggtgaagtgattgagact
atcaagggtaggagttccaaaacatcttcaaacatggggactttgtctattgatgacaaa
tgtagcccttgctccaatgcttgcggtgatggttgtgagtcaagagtgcaagaagaagca
tgtgattgtggagcaggaggctgctgtactggaactacaatcaaacatagtgttgcctca
aacaattccatttcgcgcaaggatggaagcagcataaatctcgtcggatggttgcttagg
aaacggaaaaaccatgtgcagaagcagatggagtctgaaattacaactgaatttgataac
aaacaagaacaggctgaacaaagtattgcttcgtggaacgcaatggataaagttcttctc
ggtggaatgcttgtgagcttcctgacaatcttagttctactgattcatcttggatttagg
acttcgtctaactaa
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