KEGG   Cannabis sativa (hemp): 115697375
Entry
115697375         CDS       T08987                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115697375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csav03019]
    115697375
   03041 Spliceosome [BR:csav03041]
    115697375
Messenger RNA biogenesis [BR:csav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115697375
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115697375
Spliceosome [BR:csav03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115697375
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 Maf_N
Other DBs
NCBI-GeneID: 115697375
NCBI-ProteinID: XP_030480213
UniProt: A0AB40EA84
LinkDB
Position
7:complement(26337017..26340062)
AA seq 398 aa
MDFSKKRKTEENGNGTTPTATTAPTTLLNLTPEDARTLLQPLTQDQLLDILQGAVLRHPD
VLDSVRSLANRDTTLRKLFVRGLGAETTSESLRSLFATYGELDEAIVIFDKNTGKSKGYG
FVTFKNADGALLALKEPSKKIDGRITVTQFAAAGVSGPNSSSSASGDVSARKIYVGNVPF
DISSERLLGHFMMYGEIEEGPLGFDKATGKSKGFAFFVYKTEEGARAALVDPIKNIDGHQ
VACKLAVDNKKTKTGAQASTGYTGDNVVPPHPSMPGSFQGAHYGPPQPGNMYQGYPGGGH
HGQGPPQQLPASNYGPPSMGNQVPPSNIGYNSNFPGSYSGTMAGDFSGRMPPSSAGPGYL
DHSQYGLTSSSLPTQHSQPPPVPRGPPGGMYQSLPHYY
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggatttctccaagaagcgcaaaaccgaagaaaatggcaatggtaccactccaaccgct
accactgcccctaccactcttctcaatctcaccccagaagacgctcgcacactccttcag
ccactcactcaagaccaactccttgatattctccaaggcgctgtacttcgtcaccctgac
gttctggactccgtacgctctctcgctaaccgcgataccactctccgaaagctcttcgtc
cgtggcctcggcgctgaaactacatccgagtccttgcgttccctcttcgccacgtacggc
gaactcgacgaggccatagttatctttgacaagaacactgggaaatccaaaggttacggc
tttgtcaccttcaaaaacgccgatggcgccttactcgctctaaaagagcccagcaagaag
atcgacggcagaatcactgtgacccagttcgccgctgctggagtttctggacctaatagc
tcatcctctgcctccggtgacgtttcggctagaaagatatacgttgggaatgtaccattc
gatatttcctcggagaggcttttgggtcacttcatgatgtacggggaaattgaagaaggg
ccattaggtttcgataaggccacaggtaagtcgaagggattcgctttctttgtgtacaag
accgaggagggtgcgagggctgcgcttgttgacccgatcaagaacattgacgggcaccaa
gttgcctgtaaattggctgtagataataagaaaactaagacgggtgctcaggcttctact
ggatataccggtgacaacgtggtaccacctcatccgtcgatgcccggctcttttcagggt
gcacattatggtccaccacagccaggcaatatgtatcaaggatatcctggtggagggcat
catgggcagggccctcctcaacaactgcctgctagtaattatgggccgccgtctatgggt
aatcaggtgccaccttcaaatattggatataatagtaactttccaggttcgtacagcggt
acaatggccggagattttagtggtcggatgcctcccagttctgcaggaccaggctaccta
gaccattcacagtatgggttaacttcatcttctttaccaactcagcatagccaacctccg
cctgtgcccaggggaccgcctggtggaatgtatcagagcttaccgcattattattga

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