Cannabis sativa (hemp): 115697386
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Entry
115697386 CDS
T08987
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115697386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115697386
03110 Chaperones and folding catalysts [BR:
csav03110
]
115697386
03029 Mitochondrial biogenesis [BR:
csav03029
]
115697386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115697386
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115697386
Messenger RNA biogenesis [BR:
csav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115697386
Chaperones and folding catalysts [BR:
csav03110
]
Heat shock proteins
HSP60 / Chaperonin
115697386
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115697386
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115697386
Exosomal proteins of other body fluids (saliva and urine)
115697386
Exosomal proteins of breast cancer cells
115697386
Exosomal proteins of colorectal cancer cells
115697386
Exosomal proteins of bladder cancer cells
115697386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
115697386
NCBI-ProteinID:
XP_030480228
LinkDB
All DBs
Position
7:39475863..39482475
Genome browser
AA seq
615 aa
AA seq
DB search
MACSRNPISALSFTNTSLPKRVSSLSILNPKAMAKEVYFNHDGSTRKKLQAGVDMVAELL
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNELAGD
GSTTSIILAQGLISEGMKVISAGMNPVQIARGIEKTAKALVSELKIMSREVEDHELAHVA
AVSAGNDYMVGNMISDALHQVGKRGVVTIEKGKSTENSLQVVEGMQFDRGYLSPYFVTDR
RKMMVEFHNCKLLLVDKKITDPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLK
GVLKAAAVKAPAFGERKSHYLDDIAILTGATVIRDEMGFTLDKAGIEVLGTATKVVISKD
STLIVTDGSTRDAVNKRVTQIQRLVENTEENFQKKILNERIARLSGGIAIIQVGAQTQVE
LKDKQLRIEDALNAAKASIKEGVVVGGGCSLLRLSTKVDGIKQDLDNDEQRIGAEIFKRA
LSYPVKLIAKNAGVNGNVVVEKILQDDNTMFGYNAAKDCYEDLMKSGIMDPTKVVRCCLE
NAASVAKTFLTSDAVVVDIKEPLPFPRRTPMPMPVSTRTPIPLPTRAPIPMPTRLPRQAP
MPMPMPPPGFGPTGL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgttctcgaaacccaatctccgcactttctttcaccaacacgtcactgcccaaa
agagtttcttcactttctattctaaacccaaaggcaatggccaaagaagtctactttaat
catgacggttcaacgagaaaaaagcttcaggcaggggtggacatggtggctgagttgctt
ggggttacattgggccccaaaggaaggaatgtagtgctgcagaataagtatggaccccca
aagattgtcaatgatggagagactgttctcaaagagattgagttggaagatcctttggag
aatgttggagtaaaattggtaaggcaagctggggccaagacaaatgaacttgctggtgac
ggttctaccacatccataattcttgctcaaggccttatttctgaaggcatgaaggttatt
tcagctggcatgaatccagttcagatcgctcgtggaatcgaaaagactgcaaaagccctt
gtttctgaacttaaaataatgtccagagaggttgaggatcatgagcttgcacatgtcgct
gcggttagtgcagggaatgattatatggttgggaacatgatttctgatgcccttcatcaa
gtaggaaaaagaggtgttgtcacaattgaaaaagggaagtctacagagaacagtctacaa
gttgtcgaaggaatgcaatttgatcgtgggtacttatctccttattttgtcaccgataga
cggaagatgatggttgaatttcataattgtaagttgcttctggttgataaaaaaattaca
gacccaaaggagatgtttaaaatattggacaatgcagtaaaagaaaagtatcccattgta
atagttgcagagggcattgagcaggaagctctggctccagttatcagaaataaactcaag
ggtgtgctgaaggcagctgctgttaaggcccctgcctttggtgagcgtaagagccattac
ttagatgacattgccatcttaactggagcaactgtaatcagagatgagatgggttttact
cttgataaggctgggatagaggtattgggcactgctacaaaggttgtgataagtaaggat
tctacattaattgtgactgacgggagcactcgggatgcagtcaataagagagttactcag
atccagagacttgttgagaacactgaagaaaattttcaaaagaagatactgaatgaaaga
atagctagactatcaggaggaattgctattattcaggttggggcccaaacacaggttgag
ttaaaggataaacaacttagaattgaagatgcactgaatgctgctaaggcttcaattaag
gaaggagtcgtagttggcggtggctgtagccttttaaggttatcaaccaaggtggatggt
atcaaacaagacttggataatgatgaacaacggattggagctgagatcttcaaaagagct
ttaagttatccagtgaaactgattgcaaaaaatgcaggtgttaatggcaatgttgttgtg
gagaagattctacaagatgataatacaatgtttgggtacaatgccgcaaaagattgctat
gaagatcttatgaaatctgggattatggatccaacaaaggtagttagatgttgtttggag
aatgcagcctcagtagccaaaacctttctgacgtccgatgctgttgtagttgacattaaa
gaaccacttccgtttccaaggagaacgccaatgcccatgccagtttctacaagaacacca
attccattgcccacaagggcaccaataccaatgcccacgagattgccaagacaagcaccg
atgccgatgccaatgccaccaccaggttttggaccaactggtttgtag
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