Cannabis sativa (hemp): 115697415
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Entry
115697415 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115697415 isoform X2
KO
K08518
syntaxin-binding protein 5
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115697415
Membrane trafficking [BR:
csav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115697415
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115697415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
Synaptobrevin
Beta-prop_HPS5
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
115697415
NCBI-ProteinID:
XP_030480266
LinkDB
All DBs
Position
7:complement(5000739..5015207)
Genome browser
AA seq
1118 aa
AA seq
DB search
MFAKRLLHKVAHNSQQNLKQGNLTETDLDLRISVHYGIPSTSSLLAFDPIQRILAIGTLD
GRIKVIGGDGIEGLLISPKQLPFKNIEFLQNQGYLVSILNDNDIQVWNLERRCLVCCLQW
ETNITAFAAIHGSNFMYVGDEYGLMSVIKYNVEEESLLQFPYHVSASTISDVTEFPFLDD
QPIVGVLPQPRSSGNRVLIAYQNGLVALWDVIDSRVVFSGGGKDLQLKDEFIEPSGDTNV
DSLEHSSKHQLEEKEISALCWASSSGSILAVGYVDGDILFWNTSSSASSKGQQQALSSSK
NVVKLQLSSAERRLPVIVLQWSASNKSRNDCDGQLFIYGGDEIGSEEVLTVLTLEWSSGM
ESVRCVSRTDLTLSGSFADMALVPSAWVTGSNKNADVFVLTSPGELHFYDGVSLSSLTSQ
EEKKQSISAVEFPAVIPVSDPTITVAKFIKVPLGKNSDISEEINSIMRTGSISSPADGAK
WPLTGGVPSQLSTSKNKKTERLYLAGYSDGSVRIWDATLPVLSFVLLLEGQVQSIEVAGS
GAPISELDFCFLTLSLAIGNECGLVRIYNLKGCLDGGNFHFVTDSKHEVHSLSQGKEVQC
SAVFALATSPVQTLEFVHSGAKLAVGYKCGRVAVVDMSSLSVVFLLNDLSSSNSPVISIS
WTEMANSHSPSKNSETNTSQPSLNAAREVMFILTKDANINVIDGSNGNSISPRPGNLKKK
SIAVSMYVIEGIVSTSKVYNEKQPEESLKDKAIPEGPGPDGSPSGITSDESEHNPLSDPS
KNSGENLLDTFVLLCCEDSSRLYSTKSVIQGNNKSIYKVKHAKPCIWTSIFRKDENVQGL
VLLFQTGAVEIRSIPDLELVKESSLMSILRWNFKANMNKMMSSSDNGQITLANGCEVAFI
SVLASENDFRIPESLPCLHDHVLAAAADAAVSHSINQKKKPGTAPGIIGGIVKGLKVGKV
DHSVDSTKSPKSTFNQLEGIFLKSQHATSTSYVDHQEAVELNIDDIEIDEPLPLPSSSID
DHKNIKKEKGSERERLFGGGTDDITPRVRTREEIMAKYGKAKDASSAAANAREKLVERKE
KLERLGKRTEELQNGAEDFASMANELVKTLENRKWWQI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagcgtctcttacacaaagttgctcacaattctcagcagaacttgaaacag
ggtaatttgaccgaaacggacttggacctgcggatttcagttcactatggcattccttct
acctcttctcttcttgctttcgaccccattcagcgaattttagccattggaacactggat
ggaaggataaaagtgatcggtggtgatggcattgaaggacttcttatatccccaaagcaa
ttacctttcaaaaatatcgagtttctgcaaaaccagggatatttggtcagcattttaaat
gacaatgatatccaggtttggaatcttgagagaaggtgcttagtttgctgtttacagtgg
gaaaccaacataactgcttttgctgcaatccatggctccaatttcatgtatgttggtgat
gagtatggtttgatgtctgtgataaagtacaatgttgaagaggaaagtcttttgcagttt
ccgtatcatgtttcagcaagtactataagtgatgtcaccgaatttccatttcttgatgac
caaccaattgttggcgttcttcctcaacctcgttcctcaggaaacagagtactgattgca
tatcagaatgggttggtagccctttgggatgttattgactctcgagttgttttttctgga
ggtggtaaggatctccagcttaaggatgaatttatagaaccctcaggtgacaccaatgta
gattctctagaacattcatctaaacatcagttggaagagaaggaaataagtgctctttgt
tgggcatcttctagtgggtccattcttgctgtggggtacgtggatggagatattttgttt
tggaacacatcatcctctgcttcaagtaaaggtcaacaacaggctttgtcatcatctaaa
aatgttgttaagttacaattatcatctgccgaaaggagactccctgtcattgtcttacaa
tggtctgcaagtaataaatcccgtaatgattgtgatggccagctgtttatttatggtggt
gatgaaataggatctgaggaagttttaacggttttaacacttgaatggtcatctggaatg
gagtctgtaagatgtgttagtcgcacagatcttacactcagtggctcttttgcagacatg
gctttggtacctagtgcttgggtaaccgggagtaacaaaaatgctgacgtttttgtgcta
acaagccctggggagctgcacttttatgacggtgttagcctctcttccttgacatcccag
gaagagaagaaacaatctattagtgcagtagaatttcctgcagtgatacctgtgagtgat
ccaaccatcactgtagcaaaatttattaaggtccctcttgggaagaactcagacatatcc
gaagagataaactcaattatgagaacaggctcaatttcatccccagctgatggagcgaag
tggccactaactgggggggtgcctagtcagttgtctactagtaaaaataaaaagacggag
agactgtatctagctgggtattcagatggatctgttaggatatgggatgccactttacca
gtcttatcttttgttcttcttttagaagggcaggtgcaaagtattgaagtcgctggttca
ggtgctcccatctcagagttggatttctgctttctgactttaagtttggctattggcaat
gaatgtggtctggttcgtatttataatcttaaaggatgcttagatggaggaaacttccac
ttcgtcacagattctaaacatgaagttcacagtttgtctcaaggaaaagaggttcagtgt
agtgctgtttttgctcttgctacttcccctgttcaaacattagagtttgtgcattctgga
gctaaacttgctgttggatataaatgtggccgtgttgcagtagttgacatgagttcctta
tcagttgtgttcctactaaatgatttatcatcctccaactctccagtgatttcaataagt
tggacagaaatggcaaactctcatagtccatcaaagaactcagaaacaaacacttctcag
ccttctcttaacgctgcaagggaagtgatgttcatcttaacaaaggatgcaaatattaat
gtcattgacggcagtaatggtaattcgatcagtccgcgaccagggaacttgaaaaaaaaa
tcaattgcagtttcaatgtatgtcatagagggtatcgtttctacttctaaggtatacaat
gaaaagcagccagaagagagcttaaaggataaagctattccagaggggcctggtccagat
ggttctccgagtggaataacttcagatgaaagtgaacacaaccctttatccgatccttct
aagaattcgggggaaaatttattggatacatttgttttgctatgttgtgaggattcatca
cgcctgtactccacaaaatctgtaattcagggaaacaataaatctatttacaaagtaaaa
catgcaaaaccatgcatctggacttcaatttttaggaaagatgaaaatgttcagggatta
gtgttgctgtttcagactggagcagttgaaatcaggtcaataccagatttagaattggtg
aaagaaagctccttgatgtctattctgaggtggaattttaaggcaaatatgaataagatg
atgagttcttccgataacggacagataacactggcaaatggttgtgaagtggcattcatc
tctgttttagctagtgaaaatgattttaggatcccagagtctttgccatgtctccacgat
cacgttcttgcagctgctgcagatgctgccgttagtcactcaataaatcagaagaaaaag
ccgggtacagccccaggaattataggtggtattgtcaaaggtctgaaggttggaaaagtg
gaccacagtgtcgattctacaaaaagtcctaaatccacttttaatcaattagagggaata
tttctcaagtctcagcatgcaacctctacttcatatgttgatcatcaagaagctgtggag
cttaatatagatgatattgagatagatgaacctctacctttaccatctagttcaatcgat
gatcataaaaatataaagaaagaaaaaggttcagaaagggaacgcttatttggaggtggg
actgatgatattacgcctagagttagaactcgggaagaaattatggctaaatatggaaag
gctaaggatgcttcctctgcggctgcaaatgcaagagaaaagctagtagagcggaaggaa
aagcttgagagactcggcaaacggactgaagagctgcagaatggagctgaagattttgca
tcaatggcgaatgagcttgtcaagacactggaaaatcgaaaatggtggcagatataa
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