Cannabis sativa (hemp): 115697419
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Entry
115697419 CDS
T08987
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03082
ATP-dependent chromatin remodeling
csav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115697419
03083 Polycomb repressive complex
115697419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115697419
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115697419
Histone modification proteins
HAT complexes
HATB complex
115697419
HDAC complexes
Sin3A-HDAC complex
115697419
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115697419
PRC2.2
115697419
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115697419
Heterochromatin formation proteins
Other heterochromatin formation proteins
115697419
Chromatin remodeling factors
NuRD complex
115697419
NuRF complex
115697419
NuRF complex (fruit fly)
115697419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD_LRWD1
NBCH_WD40
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
115697419
NCBI-ProteinID:
XP_030480272
LinkDB
All DBs
Position
7:44882157..44886957
Genome browser
AA seq
423 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDSRHYEDDRTDVGGFGSTNGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVFVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVSWHLRHE
YLFGSVGDDQYLLIWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTTLHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSIEDQE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPEEAT
KSS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaggaggagatgaggggagagattgaggagaggttgataaacgaggag
tacaagatatggaagaagaacaccccttttttgtacgatctggtcatcacccatgcccta
gaatggccttctctaaccgtcgaatggcttcccgaccgggaggagccaccggggaaggat
tactctgttcagaagatgattcttggtactcatacttctgagaatgagcccaattatctt
atgcttgctcaggtccagcttcctttagaggatgcagaaaatgattcccgccattacgag
gatgaccgcaccgatgtcggtggatttggctctaccaatggcaaggtacaaataattcag
cagataaatcatgatggagaggtaaatcgagcccggtacatgccacaaaatccatttatc
atcgctacaaagacagttagtgccgaagttttcgtctttgattatagtaaacatccatct
aagcctccattagatggcgcgtgcagtcctgatctaaggttacgggggcatagcactgaa
ggatatgggttatcttggagtaaatttaaacaaggtcatttgctgagtggctctgatgat
gctcagatatgtttgtgggatattaatgctactcctaaaaacaagacccttgaggctatg
cagatttttaaggttcatgaaggtgttgtggaagacgtttcctggcatttgaggcatgag
tacttatttggttcggttggtgatgatcagtacctgctcatatgggatcttcgaactcca
tctgttactaagcctgttcaatctgtagttgctcatcaaagtgaggttaattgtttggcg
tttaatccctttaacgaatgggttgttgcaactggatccaccgacaaaactgtgaaacta
tttgacctacgcaaaatcagtaccacactccacacatttgattgtcacaaggaagaggtt
ttccaagttggatggaatcctaaaaatgaaactatcctagcttcttgttgccttggccgg
agactgatggtgtgggatcttagcagaatcgatgaggagcagtcaatagaggatcaggaa
gatggtccaccagaattgcttttcattcatggtggtcacacaagtaaaatatctgatttt
tcgtggaacccatgtgaagattgggttatttctagtgtggccgaggataatattcttcag
atctggcagatggcagagaacatctaccatgatgaagatgatttaccagaggaagccacc
aagtcatcttag
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