KEGG   Cannabis sativa (hemp): 115697424
Entry
115697424         CDS       T08987                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csav04812]
    115697424
Cytoskeleton proteins [BR:csav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     115697424
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR19_1st WD_LRWD1
Other DBs
NCBI-GeneID: 115697424
NCBI-ProteinID: XP_030480280
LinkDB
Position
7:complement(564807..571807)
AA seq 917 aa
MAKRGYKLQEFSAHSGNVNCLSIGKKGCRHFVTGGDDQKVNVWPIGKSTSLTCLTGHTSP
VECVGFDSTEVLVLGGASNGVIKQWDLEESKMVRTLSGHRSNCTAVEFHPFGEFFASGSM
DTNLRVWDIRKKGCIHTYRGHTKGVSTIKFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF
KFHEGAVQSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRVIGFHPDGRT
LFAGLEDSLKVYSWEPVLCHDTVDMGWSTLGDLCIHEGKLLGCSYYQNSVGVWVADISHI
EPYGDASQNDCTEPKLNLKLQESSERAPTIVRTSSLRSRSPDYETKEIKNIYVDSAGGKP
VARPKIESLTSPKVSPHLDTKETDDLVTKKPSQAVNKSLFVPSVVPRQSSDGKDSANSTS
ESITFSRTKRGMLLRPAHVRRPSNSRNDVEKLSVSSTIESSPVSKLMNKLDGAADSNCET
KTVIEDRVEKHSAAIDCVTEKLDKVLSPPRTPASQEKETTQTSNKALNSSKDKPVKYVNG
VAVVPGRTRSLVERFEKREKVNGNEDQAGGVAICAVPEIDKTPPPMKQKEEPRIPTRNEE
PHILTWNEEPQIPTRVVEKPQTPPTKNEEPQIHTRIEKPRTPPTKNEEPQIPTRIEKPRT
PPTKNEEPPQIPTRIERPQIPTRNVRPQIPIRNGKPQIPTTRNEKPPIPTRNEELQVQIP
TIRNEKPPIPTGIEEPQIPIRSFASADVRDGTEDLMQTHDVFLSTLRSRLTKLQVVRHFW
ERKDIKGAINAMRKLPDHSVQADVINVLIDKMDIVTLDVFSCLLPVLIGLLDSKTERHTT
LSMEILIKLVAVFGPVITSAISTPRAVGVDLHAEQRVECCKQCSNHLQQVLKILPSLVRK
GGLVGRSAQELNLVLQA
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatataagctacaggaattttcagctcattcagggaatgtaaattgt
ctaagtattggaaaaaagggttgtagacattttgtgacaggaggggatgatcagaaagtt
aatgtttggccaattggaaaatcaacttccttaacttgtctaactggtcatacaagccct
gttgagtgtgttggttttgattcaacagaagttttagtccttggtggagcttctaatggt
gtcattaagcaatgggatttagaagaatcaaaaatggttcgcacgctttctggacacaga
tccaactgtactgctgttgaatttcatccttttggcgagttctttgcatctggttcgatg
gataccaatttaagggtatgggatattagaaagaaagggtgcattcatacgtacaggggt
catactaaaggcgtaagcaccattaaattcactcctgatgggcggtgggttgtttctggt
gggcttgataatgtcgtaaaggtgtgggatcttactgctggaaaactcttgcacgagttt
aagttccacgaaggagcggttcagtccttagattttcatcctctggaatttcttttggcc
acaggttcagcagacagaactgtcaaattctgggatttggaaacctttgaattgattgga
tcaacccgacctgaggcaacgggagtccgtgtgattggctttcatccagatggtaggact
ttgtttgctggactagaagatagtttgaaggtctattcgtgggagccggttctttgtcat
gacactgttgatatgggatggtcaactcttggtgacttgtgcattcatgaaggaaaactg
ttgggatgctcatactaccaaaattctgttggagtttgggtagcggatatatcgcatatt
gaaccatatggagatgcttctcaaaatgattgcaccgagccgaagcttaatcttaaactc
caagagagctcagagagagcgccgaccatagtaaggacttcaagtttgcgatctcggtct
cctgattatgagacaaaggaaataaagaacatatatgtggactctgctggaggaaagcct
gttgctcggccgaaaattgagtctttaacttctccaaaagtgtcaccccatttggataca
aaggaaacggatgatttggtgacaaagaagccaagtcaagcagttaataaatctttgttt
gtgccaagcgttgtaccccgtcagagttctgatgggaaagattcggccaattctacgagt
gaatctattaccttttcgaggactaaacgtggtatgttacttagaccggctcatgtaaga
agaccatcaaacagcagaaatgatgtggaaaagttgtcggtgtcatctactatcgaatca
tcgcctgttagcaaattaatgaataaattagatggagcagcggactcgaactgtgaaaca
aaaactgttatagaagatagagtggaaaaacattctgctgctattgattgtgtaaccgaa
aagcttgacaaagttctatctcctccgaggacacctgctagtcaagaaaaagaaacaact
caaacaagtaataaagccttgaattccagcaaagataagcctgtaaaatatgtcaatgga
gttgcagttgttccgggaagaactcgatcccttgttgaaaggtttgaaaaaagagagaaa
gttaatggtaatgaagatcaagctgggggtgtagctatctgtgcagttcctgaaattgat
aaaacacctcctcctatgaagcagaaagaagaacctcgaattcctaccagaaatgaagaa
cctcatattcttacctggaatgaagagcctcaaattcctaccagggttgttgaaaaacct
caaactcctcccaccaagaatgaagaacctcaaattcataccaggatcgaaaaacctcga
actcctcccaccaagaatgaagaacctcaaattcctacaaggattgaaaaacctcgaact
cctcccaccaagaatgaagagccgcctcaaattcctaccaggatcgaaagacctcaaatt
cccaccagaaatgtaagacctcaaattcccatcagaaatggaaaacctcaaattcccacc
accaggaatgaaaagcctccaattcccaccaggaatgaagaacttcaagttcaaattccg
accattaggaatgaaaaacctccaattccaaccgggattgaagaacctcaaattcccatt
aggagttttgcctctgcagatgttagggatggtactgaagaccttatgcaaactcatgat
gtattcttgagcacccttcgttctcgcttgacaaaattacaggtggtgcggcatttttgg
gaacgaaaagatattaaaggtgctattaatgccatgaggaagttaccggatcattctgta
caagcagatgtaatcaatgttctcatagacaaaatggatatcgttacgctagatgtgttc
tcttgcttgcttccggtgcttatcggtttacttgatagcaaaacagaaaggcacactaca
ctgtcaatggagatactaattaagcttgtagcagtgttcggtccagtgataacctcagcc
atttcaacaccacgagcagtcggtgttgatcttcatgcagagcaaagggtggaatgctgc
aagcaatgttctaaccatctgcaacaagtcctgaagattcttccatcacttgtgaggaag
ggtggtttggtgggcagaagtgctcaggaattgaatctagttcttcaagcataa

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