Cannabis sativa (hemp): 115697439
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Entry
115697439 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115697439
KO
K07456
DNA mismatch repair protein MutS2
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115697439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115697439
DNA repair and recombination proteins [BR:
csav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115697439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DUF2117
Motif
Other DBs
NCBI-GeneID:
115697439
NCBI-ProteinID:
XP_030480307
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Position
7:1170565..1175197
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AA seq
894 aa
AA seq
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MLFNSLSQLVPPMQLLNLRFRFRSPPPPFHLFSRPLKPSSFSSVAATATLSQTLQSETLE
LLEWGSLCKQLSVFTSTSMGFSTAQNARIPFGRSREESQKLLDQTVAATKVVEVMGSKPS
DFSAIEDVSEILNSASSGELLTIKEICEIRRTLMAARALYEKLDELASIDDCNERYLPLL
ELLQNCNLHVELVRKIGFCIECNLSIILDRASDDLEIIRSERKRNMEKLEALLKEVSSKI
FQAGGIDSPLVTKRRSRMCVGVRASHRHLVPGAVVLDASSSGATYFVEPGDIVDLNNMEV
KLSSAEKAEEIAILSMLTSEIANSTRDIEYLLDKVLEIDLAFARAGHALWINGVCPTFSE
FSKDIDDSVSVDIDQIQHPLLLESMRKQSSLDVVFDTPVPIDVKVGYGTRVVVISGPNTG
GKTASMKTLGLASLMSKAGMFLPAKNHPKLPWFNLVLADIGDHQSLEQNLSTFSGHISRI
RNILEVTSEESLVLLDEIGGGTDPSEGLALSASILQYLKDRVKLAVVTTHFADLSRLKEK
DDRFENAAMEFSLETLRPTYQILWGSSGDSNALNIAKTIGFDQRVIENARKWMEKLVPEQ
QQKRKGLLYQSLIGERGRLEAQAKRAASLHSKVIQIYSEIQDEAEDLDRREKALMVKETL
QVQKDVETAKSQMETVLQEFENQLRTASPDQFNNLIKKSESSISSILQVHCPSYGEDKEN
TDFYTPEVGEQVYLTGLRDNIGTVVEAPVDDETILVQYGKIKVRVKKSDIRAMPNRNKKA
TTSSTPRVKKQLQQSREFQTPSDNSKEGEVSYGAAVQTSKNTVDLRGMRVEEASFHLDME
ISAREPGSVLFIIHGMGTGAIKENAIEILRNHPRVVDYEQESSMNYGCTIAYIN
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcaactcactgagtcaactcgttcctccgatgcaactccttaacctccgattc
cgattccgatcaccaccacctccatttcacctcttctccagacccctcaaaccttcctcg
ttctcctccgttgctgccaccgccactctctcacagactctccaatcggaaaccctagag
cttctcgaatggggatcgctctgcaaacagctctcggtgtttacatcgacatcaatgggc
ttctcaaccgcacagaacgccagaattccctttggccggtctcgggaggagagccagaag
cttctggatcaaaccgtggccgctaccaaggtcgtggaggttatgggttctaaaccgtct
gatttctcggcgattgaggatgtttccgagattttgaattcggcaagttctggagaattg
cttacgattaaggagatttgtgagattaggaggacgcttatggctgctagggctttgtat
gagaaattggatgaattggcttcgattgatgattgcaatgagaggtacttgcctcttctt
gaactgctccagaattgcaatttacatgtggagttggttagaaagataggattttgtata
gaatgcaatctttcgatcatacttgatagagctagtgatgatttagagattattagatca
gagagaaagagaaacatggaaaagttagaagctttgttaaaggaagtgtcatctaagatt
tttcaggctggtggcattgacagtccattagttacaaaacgtcggagtaggatgtgtgtc
ggggttagggcttcccataggcatttggttccaggtgctgtagttctagatgctagtagt
tctggtgcaacatattttgtggagcctggggatatagtcgacttgaataacatggaggtg
aagctttcgagtgctgagaaagctgaggagatagccatcttgagtatgctaacatccgag
atagcaaactcgacaagagacatcgagtatcttttggataaggttttagaaattgatctt
gcttttgctagagccggtcatgctctgtggatcaatggggtatgccctactttttcagaa
tttagtaaggacatagatgattctgtttctgtggatattgatcaaatacaacatccgttg
ctcctcgagtctatgaggaaacaaagttctttagatgttgtatttgatactcctgtaccg
atagatgtcaaagtcggatatggcaccagagtggttgtgatttcggggccaaatactgga
gggaaaactgcttcaatgaagactttgggtttggcttctcttatgtcaaaagctggaatg
tttcttccagctaaaaaccatccgaagcttccatggtttaatcttgttttagcagatatt
ggagatcaccagtctctagaacaaaatctctcaacttttagtggacacatatcgcgaatt
cgtaacatcttagaagtgacctcagaagaatcacttgtcctgttggatgaaatcggaggt
ggaactgatccttcagaaggtttggctctttcggccagcattttgcagtatctcaaagat
cgtgttaaattagctgttgtgactactcattttgcggacttaagccgtctcaaagaaaag
gatgaccggtttgagaatgcagccatggaattttccctggaaacattacgaccaacttat
cagatcctttggggaagtagtggcgattcaaatgcattaaatattgctaaaactatcggt
tttgatcaacgtgtcattgaaaatgcccgtaaatggatggagaagttagttccagagcag
cagcagaagcggaaaggattgctgtatcaatcattgattggagagaggggccgactcgaa
gcacaggctaaaagagctgcatctctacattcgaaagtcattcaaatttatagcgagatc
caagatgaggctgaagatcttgataggagggaaaaagctttgatggtcaaggagacctta
caggttcaaaaagatgttgaaactgcaaaatcacaaatggaaactgtgctgcaagaattc
gaaaatcaactcagaacagccagtcctgaccaattcaataatctgatcaagaaatcagaa
tcttccatttcatctattcttcaagttcactgtcctagttatggtgaggataaagaaaac
accgatttttatacaccagaagttggagagcaagtttatttgacaggactcagagataac
ataggcactgtagttgaagctccagttgatgatgaaacaatcctagttcaatatggtaaa
attaaggttcgggtaaagaaaagtgacattagagctatgcctaatcgtaacaagaaagcc
actaccagttccaccccacgagtaaagaagcagcttcaacagagcagagaattccaaact
ccaagtgataacagcaaagaaggagaggtttcttatggtgcagcagtgcagacatcaaag
aacacagttgatctacgtggcatgcgggtagaggaagcttctttccatttggatatggaa
atctcagctcgagaaccaggttctgttctctttatcatacatggtatgggcaccggagct
atcaaggagaatgccattgagattttaagaaaccatcctcgagttgttgattatgaacag
gaaagctccatgaactatggctgtacaattgcatacataaattaa
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