KEGG   Cannabis sativa (hemp): 115697459
Entry
115697459         CDS       T08987                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115697459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    115697459
Spliceosome [BR:csav03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115697459
 Complex B
    115697459
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 115697459
NCBI-ProteinID: XP_030480331
LinkDB
Position
7:1107347..1113657
AA seq 532 aa
MSDNDGSGDDYATFRSKRNSNGSGYERSMTRDYKDRSGRGGDRGRGGRNDYDRRHSRDHD
RRRDYDQGRDRDRGDRGERERERDRDRRPRHRERSRSKERSRSPSSSRSRSKSKRGSFFD
VAPPSVNMMPGADMPGQLLAVPQTTPGVVPNMLPFGTTQLSLPMMPAQAMTQQATRHARR
VYVGGLPPLANEQTIATFFSGVMAAIGGNSSGSAGDAVVNVYINHEKKFAFVEMRTVEEA
SNAMALDGIIFEGVAVRVRRPTDYNPALAATLGPSQPSPHLNLAAVGLIPGAITGAEGPE
RVFVGGLPYYFTEEQIKELLESFGPLRGFDLVKDKDTGNSKGYGFCVYQDPAVTDIACAS
LNGLKMGDKTLTVRRATMSAGQSKSEQDSILAQAQQHIAIQKMALQAGGVRLPVGGMGFG
GNGESPTKILCLTEAISADQLANDEEYEEILEDMKDECGKFGTVVNVIIPRPSSQSGEPT
SGVGKVFLEYADTTGCANARNVLNGRKFGGNIVNAVYYPEDRYYSKDFSYSA
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtctgataatgatggtagtggtgacgactacgctacttttcggagcaaacgtaattct
aatgggtcaggctatgagaggtccatgacgagggactataaggatagaagtggtagagga
ggtgacagaggaaggggcggtcgtaatgactatgaccgtcgtcacagccgagatcatgac
aggcgacgagattatgatcaaggaagagatagagatagaggagatagaggagagagagaa
agagaaagagatagagatagaaggcctaggcatagagaacgttcacgctcaaaggaaaga
tcaagatcaccctcttcttcacgttctcgttctaaaagcaagcgaggtagtttcttcgat
gtggcgccaccttctgtgaacatgatgcccggtgctgacatgccagggcagctgttggct
gttcctcaaacaacacctggagtggtgccaaacatgttaccctttggaacaacacaactt
tctcttcccatgatgccggcccaggctatgactcagcaggctacaaggcatgctcgccga
gtatatgttggtggacttcctccgttagctaatgagcagaccattgcaacattctttagc
ggtgtcatggctgcaattggaggaaactcctccggctcagcaggtgatgcagttgttaat
gtctatatcaatcatgagaagaagtttgcatttgtggagatgagaactgttgaagaagca
agtaatgcaatggcacttgatgggatcatatttgagggtgttgctgtaagggtgcggagg
ccaactgactataatcctgcattagctgcaacacttggtcctagccaacctagtcctcac
cttaacttggctgctgtcggactcattccaggtgcaatcactggagcagagggacctgaa
cgtgttttcgttggtgggcttccgtattacttcactgaagagcagataaaagaattgttg
gaatcctttggacctctccgtggcttcgaccttgttaaggataaagacactggaaactct
aaaggatatggtttttgtgtttatcaggacccagctgtgacagacattgcctgtgcttct
cttaatggtttgaaaatgggggataaaactctaactgttcgacgtgctactatgagcgct
gggcaatccaaatcggaacaggatagtattttggctcaggcgcaacagcatatagctatt
cagaaaatggcactgcaagctggcggtgtaagacttcctgtaggcgggatgggctttgga
ggaaatggagaaagtccaactaagattttatgtctcaccgaggcaattagtgctgatcaa
ctggcgaacgatgaagaatatgaagaaattttagaggatatgaaggatgaatgtggcaaa
tttggaactgtggtgaatgtcatcattcctcggccgagtagtcagagcggagagccaacc
tcaggtgtcggaaaggtgttcttggaatatgcggataccacgggttgcgcgaatgcgagg
aatgtattgaatggaagaaaatttgggggtaatattgtgaatgctgtttattatccagaa
gacagatattatagcaaggattttagttatagtgcctaa

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