Cannabis sativa (hemp): 115697626
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Entry
115697626 CDS
T08987
Name
(RefSeq) rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115697626
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115697626
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
115697626
NCBI-ProteinID:
XP_030480569
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Position
X:74478081..74496447
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AA seq
699 aa
AA seq
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MDQPTTIIISLSNFQLFTKSSLIIIIILIHSMTNVTTTQAQLNNYKFPANDTNILPPTVS
FPFPKLHIYDKYVEMDNGILQVTLLKPAGSVTGIKYNGVDNLLEALNGEFNRGYWDLVWI
GNGSKGKKGSLDRLEATDFSVILENEEQIEISFTRTWNFSLQGKVVPLNIDKRYIMLRGS
CGFYSYGIYEHLEGWPAFNLTNTRMAFKLRKDKFEYMAMADNRQRFMPLPDDREPERGQV
LAYPEAVKLINPVEPQFTGEVDDKYEYSCENKDNRVHGWISNDPPIGFWQITPNDEFRSG
GPQKQCLTSHVGPTNLAIFHSTHYSGEDLIMKFGEKEGWKKVYGPIFIYLNSLSDNLANP
FTQLWEDAKQQMKVEVQKWPYDFAQSEDFPSSQQRGNLSGRLVIYDRYVSEERICANGAF
VGLAAPGDVGSWQRESKGYQFWSKTDKDGYFSINDIRVGNYNIYAWVPGFIGDYRYDGVI
TITTDCYKEMGQLVYMPPRSGATLWEIGIPDRSAAEFYVPDPNPDYVNKLYVNHPDKFRQ
YGLWERYAELYPDEDLIYTVGVNDYSKDWFFAQVTRKIDDNTYKDSTWQIRFWLELRDVT
QIYTLRIALATAHISELQVRVNEGGANIPLFRSGVIGKDNTIARHGIHGLYWVFNIDIPG
SQLFQGNNTFFLTRTNSTTPFQGIMYDYIRLEAPPDFTH
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaccaacaacaatcataataagtttgtctaattttcaacttttcacaaaatca
tctcttattattatcataattcttattcattctatgaccaatgttacaacaactcaggct
cagctcaacaactacaagttcccggcaaacgacaccaatatcctaccgccgaccgtgtcg
tttcccttccccaagttacacatttacgataaatatgtggagatggacaacggcatacta
caagtaacgctgttaaaaccggcgggatcagtcaccggaataaaatataacggcgtcgat
aacttgcttgaagctcttaacggtgaatttaacagagggtactgggatcttgtgtggatt
gggaatggaagtaaaggaaaaaagggttcacttgacaggcttgaagcgacagattttagt
gtaatattagaaaatgaagaacaaatagagatttcattcacaagaacttggaatttctca
ctccaaggcaaggtcgttcctttaaacatagacaaaagatatataatgcttcggggttcg
tgtgggttctattcgtatgggatatacgaacacttagaaggatggcctgctttcaatctc
accaatacaagaatggcctttaagctgagaaaagacaagtttgagtacatggctatggca
gacaacaggcaaagatttatgcctcttcctgatgatagggagccagaaagaggtcaagtt
ttggcttaccctgaagctgtcaaacttatcaaccctgtggagccacaattcacaggagaa
gtggacgacaagtatgaatattcatgtgagaacaaagacaaccgggtacatggatggata
tccaatgatccacccattgggttttggcaaatcactcccaatgacgagttccgctccggt
gggccccaaaaacagtgtctcacctctcatgtgggccccaccaatcttgctatatttcac
agcacccattattcaggagaggatttgataatgaaatttggagaaaaggagggttggaag
aaagtgtacggccccatttttatttatcttaattccttatcagataacttagctaaccca
tttactcagctctgggaggacgctaaacaacagatgaaagttgaagttcaaaaatggcca
tatgattttgcacagtcagaggactttccttcatcacagcaacgtggcaacttaagtggg
agattagtaatatatgacagatacgttagcgaagagaggatatgtgcaaatggtgctttc
gtggggttggcagcgccaggggatgtgggatcttggcaaagagagagtaagggttatcaa
ttttggagcaaaacagacaaggacggctatttttcaatcaatgatataagagtgggtaac
tataatatatatgcatgggttcctgggtttattggtgattaccgatatgatggtgttatt
acaatcacaacagattgttataaagagatgggacaacttgtttatatgcccccaagaagt
ggagcaacattgtgggaaattgggattcctgatcgctctgctgcagagttttatgttcct
gatcctaatcctgattatgtaaacaaactctatgtcaatcaccctgacaagtttaggcaa
tatggactttgggaaagatatgctgagttatatcctgatgaagacttgatttacactgtt
ggggttaatgactacagtaaagattggttttttgctcaagtcaccagaaaaatcgatgat
aacacatataaagatagtacatggcaaataagattctggcttgaattgagggatgtgacc
caaatctatacactgcgtattgcccttgccactgcacacatttccgaattacaggttagg
gtaaatgagggtggagcaaatattcccttattcaggagtggagtaataggaaaagacaac
actatagcaagacatggaattcatgggctttattgggtgttcaacatagacattccaggc
tcacaacttttccaaggaaataatactttttttcttacaagaacaaatagcaccacccca
ttccaagggatcatgtatgactatattcgtctagaggctccacctgatttcacacactaa
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