Cannabis sativa (hemp): 115697784
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Entry
115697784 CDS
T08987
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115697784
09123 Folding, sorting and degradation
03018 RNA degradation
115697784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115697784
03041 Spliceosome [BR:
csav03041
]
115697784
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115697784
mRNA degradation factors
5'-3' decay
Lsm complex
115697784
Spliceosome [BR:
csav03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115697784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
115697784
NCBI-ProteinID:
XP_030480809
LinkDB
All DBs
Position
X:18492356..18495046
Genome browser
AA seq
150 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRDEGPGGRQPKGIGRGLDD
GGAKGPGGGRGRGGSGGRAGGSRGGGRGRG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttctctgcttaagacagcccaagggcaccctatgttggtagaactgaag
aatggtgagacttacaatggacatttagttaattgtgatacatggatgaacattcatctt
cgtgaagtcatttgtacttctaaggatggagacaggttttggcgaatgcctgaatgctac
atccgggggaatacaattaagtatcttcgagttcctgacgaggtgattgacaaagttcaa
gaagaaactaagagtcgatcagataggaaaccacctggagtaggacgtggcagaggaaga
ggtagggatgagggtccaggtggacggcaacctaaagggattggccgtggactagacgat
ggaggtgctaaaggccctggtggaggccgtggcaggggtggatctggtggtagagctggt
ggaagcagaggtgggggacgagggcgtggttga
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