Cannabis sativa (hemp): 115697994
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Entry
115697994 CDS
T08987
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03020
RNA polymerase
csav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115697994
09124 Replication and repair
03420 Nucleotide excision repair
115697994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115697994
03400 DNA repair and recombination proteins [BR:
csav03400
]
115697994
Enzymes [BR:
csav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115697994
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115697994
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115697994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
115697994
NCBI-ProteinID:
XP_030481031
LinkDB
All DBs
Position
7:435326..443028
Genome browser
AA seq
1193 aa
AA seq
DB search
MDEDPEYEQQYNEDDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESSDIEIRPESQHNPGHQSDFAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLSRASSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFADT
TMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGE
FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHTLQLRENPDDAGWHDL
VAKGFIEYIDTEEEETTMISMTISDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLAQDEAQGQAASRYSRRDHS
ISLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEVKPLKDQKKKGG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaccccgaatacgagcaacaatacaacgaagatgacgatgatgaggaagaa
atcactcaggaagatgcttgggctgttatctctgcttacttcgaagaaaaaggattggtt
cgccaacagcttgattctttcgatgagttcattcagaatactatgcaagaaattgttgat
gaatcttctgatattgagattcgtcctgagtctcagcataaccctggtcaccagtctgat
tttgctgagacaatctataaaattgggtttggtcagatttatctgagtaaacctatgatg
actgagtctgatggagaaacggcgaccttgtttcccaaggctgctaggttgaggaactta
acatactctgcacctttgtatgttgatgttacaaaaagggttataaagaaaggacatgat
ggtgaagaagttactgagactcaagactttaccaaagtcttcattggaaaggttcccatt
atgcttcggtcgagttattgtacattgtaccaaaattcagagaaggatttgacagaactt
ggggagtgtccatatgatcaaggtggatattttattatcaatggtagtgagaaggttcta
attgctcaagagaagatgagtaccaatcatgtgtatgtgttcaaaaagaggcagcctaac
aagtatgcctatgtggccgaagttcggtctatggctgagtctcaaaacagaccacctagt
accatgtttgtgcggatgctttcacgagctagctctaaagggggatcatcggggcagtac
atacgagctactcttccgtatattcgagctgaaataccaattattattgtcttccgtgct
ttggggtttgttgctgacaaagacatattggagcatatatgttatgactttgccgatact
acaatgatggagttgttgcgtccttcactggaggaagcatttgtgattcaaaatcaacag
gttgcactggattatatcggaaaaagaggagcaactgttggagtcaccaaggaaaagaga
attaagtatgcaaaagagatacttcaaaaggaaatgcttccccatgttggcactggggaa
ttttgtgagacaaaaaaagcttactatttcggctatatcattcatcggcttttactgtgt
gcacttgggcggagggcagaagatgacagagatcattatggcaataagaggctggacctt
gctggtcctttactcgggggattgtttagaatgctattcaggaagctaacaagggatgtg
agaggatatgtgcagaagtgtgtcgataatgggaaggatgttaatcttcaatttgccatc
aaagccaaaactattaccagtggtcttaaatattcactggctactggaaattggggccaa
gcaaatgcagctggtacaagagctggagtgtcacaggtgttaaatcgtttgacatatgcc
tccacattgtcacacttgcgaagattaaattctcccattggtcgtgaaggaaaattggcc
aagcctcgtcagttgcataattctcaatggggaatgatgtgtcctgctgaaacaccagaa
ggacaagcatgtggactggtgaagaatcttgcattgatggtgtacatcactgtaggatca
gctgcatatcctatattggaatttttggaagagtgggggacagaaaattttgaggaaatt
tcccctgctgttattccccaagctaccaaaatttttgttaatggttgttgggttggtata
catcgtgatcctgacatgttggtgaaaacattacgacgtctgaggcgacgggttgatgtt
aatactgaggttggggttgttagagatattcgcttgaaagaactacgaatatatacggac
tacgggcggtgtagtcgaccattgttcattgtggagaaacagaggcttttgataaagaaa
aaagacatccatacattgcaactgagggaaaaccccgatgatgctggttggcatgatctt
gtagccaagggattcatagagtacattgacacggaggaagaggaaaccactatgatttca
atgacaatcagtgatcttgtgcaagcaagacttaacccagaggaggcatattccgagaca
tacacgcactgtgaaatccatccatcacttattttgggtgtttgtgcttccattatacct
tttcctgatcataatcaatcgccaagaaatacatatcaatctgctatgggcaagcaagcc
atgggaatatatgtcacaaactaccagtttcgaatggatacactggcctatgttctgtac
tatcctcaaaagcctcttgtcactacaagagccatggaacatctccactttaggcaactt
ccagccggaattaacgccattgttgctattgcttgctactcgggttataaccaggaagat
tctgtcattatgaatcagtcttctatagatcgtgggtttttccgatcacttttcttccgc
tcatatagagatgaggaaaaaaagatgggcacactagtgaaagaggacttcggtcgtcca
gatagatctaatactatgggtatgagacatggttcttatgataaattggatgatgacggt
cttgctcctcctggaactagggtttcaggagaggatgttattataggaaagaccactcct
cttgcccaagatgaagctcaaggacaagctgcttcacgttactcacgacgtgatcacagt
ataagcttacggcacagtgaaaatggtattgtggatcaagttctactgacaacaaatgcc
gatgggttgaggtttgtcaaagtgcgagtaagatctgttagaatacctcaaattggagat
aagtttagtagtcgacatggtcagaagggaacagtcgggatgacttatacacaagaagat
atgccatggactgtggaaggaatcacccccgatattattgtgaacccacatgctattcct
tctcgaatgacaatcggtcagcttattgagtgtatcatgggaaaagttgctgctcatatg
gggaaggaaggagacgcgactccgtttacagacgtaactgtggataatattagtaaagca
cttcataaatgtggttatcaaatgcgtggattcgaaaccatgtacaacggtcacactggc
cggcgtcttcctgctatgatcttcctcggaccaacatattaccaaagattgaagcatatg
gtggatgataagatccattcaaggggacgaggccccgtgcagattcttacaaggcagcct
gctgaaggacgatctcgtgatggaggtcttcgctttggagaaatggaacgggattgtatg
attgctcacggggcagctcactttctcaaagagagattgttcgatcagagtgatgcctat
agagttcatgtctgtgagcgttgtgggttgatagcaattgcaaatcttaagaagaactct
ttcgagtgcagaggttgcaaaaacaaaaccgacattgtacaggttcatattccttatgcc
tgtaagctgctattccaagagcttatggccatggccatagctccaagaatgctgacaaag
gaagtaaaaccattgaaagaccaaaagaagaaaggaggctga
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integrated database retrieval system
