| Entry |
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| Name |
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
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| KO |
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| Organism |
csav Cannabis sativa (hemp)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csav00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115697994
09124 Replication and repair
03420 Nucleotide excision repair
115697994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csav03021]
115697994
03400 DNA repair and recombination proteins [BR:csav03400]
115697994
Enzymes [BR:csav01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115697994
Transcription machinery [BR:csav03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115697994
DNA repair and recombination proteins [BR:csav03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115697994
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:435326..443028
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| AA seq |
1193 aa
MDEDPEYEQQYNEDDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESSDIEIRPESQHNPGHQSDFAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLSRASSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFADT
TMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGE
FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHTLQLRENPDDAGWHDL
VAKGFIEYIDTEEEETTMISMTISDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLAQDEAQGQAASRYSRRDHS
ISLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEVKPLKDQKKKGG |
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| NT seq |
3582 nt +upstreamnt +downstreamnt
atggatgaagaccccgaatacgagcaacaatacaacgaagatgacgatgatgaggaagaa
atcactcaggaagatgcttgggctgttatctctgcttacttcgaagaaaaaggattggtt
cgccaacagcttgattctttcgatgagttcattcagaatactatgcaagaaattgttgat
gaatcttctgatattgagattcgtcctgagtctcagcataaccctggtcaccagtctgat
tttgctgagacaatctataaaattgggtttggtcagatttatctgagtaaacctatgatg
actgagtctgatggagaaacggcgaccttgtttcccaaggctgctaggttgaggaactta
acatactctgcacctttgtatgttgatgttacaaaaagggttataaagaaaggacatgat
ggtgaagaagttactgagactcaagactttaccaaagtcttcattggaaaggttcccatt
atgcttcggtcgagttattgtacattgtaccaaaattcagagaaggatttgacagaactt
ggggagtgtccatatgatcaaggtggatattttattatcaatggtagtgagaaggttcta
attgctcaagagaagatgagtaccaatcatgtgtatgtgttcaaaaagaggcagcctaac
aagtatgcctatgtggccgaagttcggtctatggctgagtctcaaaacagaccacctagt
accatgtttgtgcggatgctttcacgagctagctctaaagggggatcatcggggcagtac
atacgagctactcttccgtatattcgagctgaaataccaattattattgtcttccgtgct
ttggggtttgttgctgacaaagacatattggagcatatatgttatgactttgccgatact
acaatgatggagttgttgcgtccttcactggaggaagcatttgtgattcaaaatcaacag
gttgcactggattatatcggaaaaagaggagcaactgttggagtcaccaaggaaaagaga
attaagtatgcaaaagagatacttcaaaaggaaatgcttccccatgttggcactggggaa
ttttgtgagacaaaaaaagcttactatttcggctatatcattcatcggcttttactgtgt
gcacttgggcggagggcagaagatgacagagatcattatggcaataagaggctggacctt
gctggtcctttactcgggggattgtttagaatgctattcaggaagctaacaagggatgtg
agaggatatgtgcagaagtgtgtcgataatgggaaggatgttaatcttcaatttgccatc
aaagccaaaactattaccagtggtcttaaatattcactggctactggaaattggggccaa
gcaaatgcagctggtacaagagctggagtgtcacaggtgttaaatcgtttgacatatgcc
tccacattgtcacacttgcgaagattaaattctcccattggtcgtgaaggaaaattggcc
aagcctcgtcagttgcataattctcaatggggaatgatgtgtcctgctgaaacaccagaa
ggacaagcatgtggactggtgaagaatcttgcattgatggtgtacatcactgtaggatca
gctgcatatcctatattggaatttttggaagagtgggggacagaaaattttgaggaaatt
tcccctgctgttattccccaagctaccaaaatttttgttaatggttgttgggttggtata
catcgtgatcctgacatgttggtgaaaacattacgacgtctgaggcgacgggttgatgtt
aatactgaggttggggttgttagagatattcgcttgaaagaactacgaatatatacggac
tacgggcggtgtagtcgaccattgttcattgtggagaaacagaggcttttgataaagaaa
aaagacatccatacattgcaactgagggaaaaccccgatgatgctggttggcatgatctt
gtagccaagggattcatagagtacattgacacggaggaagaggaaaccactatgatttca
atgacaatcagtgatcttgtgcaagcaagacttaacccagaggaggcatattccgagaca
tacacgcactgtgaaatccatccatcacttattttgggtgtttgtgcttccattatacct
tttcctgatcataatcaatcgccaagaaatacatatcaatctgctatgggcaagcaagcc
atgggaatatatgtcacaaactaccagtttcgaatggatacactggcctatgttctgtac
tatcctcaaaagcctcttgtcactacaagagccatggaacatctccactttaggcaactt
ccagccggaattaacgccattgttgctattgcttgctactcgggttataaccaggaagat
tctgtcattatgaatcagtcttctatagatcgtgggtttttccgatcacttttcttccgc
tcatatagagatgaggaaaaaaagatgggcacactagtgaaagaggacttcggtcgtcca
gatagatctaatactatgggtatgagacatggttcttatgataaattggatgatgacggt
cttgctcctcctggaactagggtttcaggagaggatgttattataggaaagaccactcct
cttgcccaagatgaagctcaaggacaagctgcttcacgttactcacgacgtgatcacagt
ataagcttacggcacagtgaaaatggtattgtggatcaagttctactgacaacaaatgcc
gatgggttgaggtttgtcaaagtgcgagtaagatctgttagaatacctcaaattggagat
aagtttagtagtcgacatggtcagaagggaacagtcgggatgacttatacacaagaagat
atgccatggactgtggaaggaatcacccccgatattattgtgaacccacatgctattcct
tctcgaatgacaatcggtcagcttattgagtgtatcatgggaaaagttgctgctcatatg
gggaaggaaggagacgcgactccgtttacagacgtaactgtggataatattagtaaagca
cttcataaatgtggttatcaaatgcgtggattcgaaaccatgtacaacggtcacactggc
cggcgtcttcctgctatgatcttcctcggaccaacatattaccaaagattgaagcatatg
gtggatgataagatccattcaaggggacgaggccccgtgcagattcttacaaggcagcct
gctgaaggacgatctcgtgatggaggtcttcgctttggagaaatggaacgggattgtatg
attgctcacggggcagctcactttctcaaagagagattgttcgatcagagtgatgcctat
agagttcatgtctgtgagcgttgtgggttgatagcaattgcaaatcttaagaagaactct
ttcgagtgcagaggttgcaaaaacaaaaccgacattgtacaggttcatattccttatgcc
tgtaagctgctattccaagagcttatggccatggccatagctccaagaatgctgacaaag
gaagtaaaaccattgaaagaccaaaagaagaaaggaggctga |
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