| Entry |
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| Name |
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
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| KO |
| K03144 | transcription initiation factor TFIIH subunit 4 |
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| Organism |
csav Cannabis sativa (hemp)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csav00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115698094
09124 Replication and repair
03420 Nucleotide excision repair
115698094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csav03021]
115698094
03400 DNA repair and recombination proteins [BR:csav03400]
115698094
Transcription machinery [BR:csav03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115698094
DNA repair and recombination proteins [BR:csav03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115698094
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:complement(1146228..1151043)
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| AA seq |
494 aa
MIIHNLRTPTPNIFTHKNPPKRLDFDFSKTLELTRPILGLLTMPQVKIIAKNFMDMVASL
PAMKLDSLYANAFICEAILRSLPPLAKKYALQMLCIEGPVSAKSMEEWVLPDGASKHKVA
IDRLLQLRVFTETSDRKREITYRLNPVFQSNLQKLLINGEVLPREPMATNLIGRLPSSEE
LNAFAVEQWECFLLQLINSSQADRPSNISSSTMKVFQRGLLSQREKEAPRLTESGFQFLL
MDTNAQLWYIIREYISNSEERDIDSAELISFLLELSFHATGEAYNLNSLSDVQRETVKDL
ADLGLVKLQQGRKDSWFIPTKLATNLSISLTDSSSRKQGFVVVETNFRLYAYSTSKLHCE
ILRLFSRVEYQLPNLIVGAITKESLYNAFDNGISADQIISFLQQNAHPRVAEKLPSVPEN
VTDQIRLWEADLNRIEATPAYYYDEFPSREVFEAACDFAREWNGLLWEDMKKMRLLVKAE
IHMNMREHLRRAKQ |
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| NT seq |
1485 nt +upstreamnt +downstreamnt
atgatcatccataaccttagaaccccaacccccaatattttcactcacaaaaaccccccc
aaaagactcgattttgatttttccaaaaccctagaattgacaagaccaattttgggttta
ctcacaatgcctcaggtgaagatcatagccaagaatttcatggacatggtggcctcctta
cccgccatgaaactcgattctctctacgccaatgcattcatctgtgaagccattctcagg
tctttgccacctctggccaagaaatatgctttgcaaatgttatgtattgaaggtcctgta
agtgctaaatcaatggaggaatgggtacttcctgatggagcttctaagcataaagttgcc
attgatcgtttacttcagttgagagtatttactgaaacttctgacaggaaaagggaaata
acttatagattaaatccagtgtttcagagtaatctccagaagcttttaatcaatggtgaa
gttttgccaagagaaccaatggctaccaatctaataggaaggcttccaagctcggaggaa
cttaatgcttttgcagtcgaacagtgggagtgcttcttgctgcaacttattaactcatct
caagctgataggccgtcaaatattagctcttctacgatgaaggttttccagcgcggcctt
ttgagtcaaagggagaaagaagctccacgattaaccgaaagtggtttccagttcttgctg
atggatacaaatgcacaactttggtatatcatcagagaatatatctctaactctgaggag
agggacattgattcagcagagttaatttcatttcttcttgagcttagttttcatgccaca
ggcgaggcgtataacctcaactcattgagtgacgttcagagggagacggtcaaagatctt
gcagacttgggattagtgaaacttcaacagggtaggaaggatagctggtttatacctact
aaactagctacaaatctttctattagcttaacagattcatcatcacgaaaacaggggttc
gtggttgtggaaacgaattttaggttgtatgcctattcaacttctaaattacattgtgag
atcttacgccttttctcacgggtagaatatcaacttccgaatcttatagttggagcaatt
acaaaagaaagcttgtataatgctttcgataatggcattagtgcagatcagataatttca
tttctgcagcagaatgcacaccctcgtgttgcagaaaaactaccatctgtacccgagaat
gtcaccgatcagatcagattatgggaagcagatttgaataggatcgaagcgacccctgca
tattattacgacgaatttccttcaagggaagtctttgaggctgcttgcgactttgcacga
gaatggaatggtttattgtgggaagatatgaagaagatgcgtctgttggtcaaggcagaa
atccacatgaacatgcgagagcaccttcgtcgtgcaaagcagtaa |
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