Cannabis sativa (hemp): 115698138
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Entry
115698138 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115698138
KO
K14315
nucleoporin NDC1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115698138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115698138
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115698138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
115698138
NCBI-ProteinID:
XP_030481174
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Position
7:complement(57575804..57580027)
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AA seq
549 aa
AA seq
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MATASPPPPAMVVKTRFLGFLIWQSIPSSLIFFFFTIFLYQLSSSASTSKPTRVSFFFTP
ILSFFTFNLAHLLFSTSLSLLSTPQSHRPAYPIQLVFGLFRLLLVPGGSDEPQTSDFRLR
AKVSIGFVLFSLAAAVSGLVAVASVCWVSALAGFDDGVGLIGRVGLRGFVMGFLYGLHYV
YNRRWVLEFPIIQRRPIFSFKMGLPSATTRALRLSSVAYLFSTGVVAFLPDQLTGQVTVG
KFSCEQIIFFLGSFAVFLSWELSHHLHRVLHTKRFVFAPPKGSAAAETNPSEPLLAALEE
SSPRSLLQYLAYLDLCMVCENNVDVWRRAAFFEESGETYKRVIAVGLRPLEQLASKLSEA
LESIENNSQISNQLLSPNDARPDPNCSELLNNFQLYLWCARMVALLTARSHQEDRYGVAQ
LSGSNAAVVSTLLSCLLAIESFMGRNINVQSPNNLMGPAGIKWATSSMRRPEIGNRKKRG
GFPHSKAYVIADAMRTSIYHIVSAFHDEMVASAKSGLLEKDWIITNKPPFGSRDLLPQKL
RLFLDFRAT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcttcacctccaccaccagccatggtggtcaagactcgttttttagggttc
ctaatatggcaatccattccctcttctctaatctttttcttcttcacaatcttcctatac
caactctcttcttccgcttctacttctaaacccaccagggtttccttctttttcactccc
attctttcatttttcaccttcaatctagcccaccttcttttctccacttccctctcactc
ctctccactccacaatcccaccgcccagcctatcctattcagcttgtgttcggccttttc
cggcttcttctggttcccggtggctccgatgagcctcaaacttctgactttcggctccgg
gcaaaggtttcgatcggtttcgtcctgttttctttggcggcggcggtttccgggctcgtg
gctgttgcgtcggtttgctgggtgagcgcattggctgggtttgatgatggggttgggttg
attggaagagttgggcttaggggtttcgtgatgggttttctctatggactgcattatgtt
tataatcgtcggtgggtcttggagttccccattattcagcgccgacctatctttagcttc
aagatggggctcccttcggctactactcgagctttgaggctttcgagtgttgcttaccta
ttctcgacaggcgtcgtagcatttctgccagatcaattaacaggccaggttacggtggga
aagttcagttgtgagcaaatcatattcttcctgggaagttttgcagtgtttctcagctgg
gaattaagtcatcacttacatcgggtgttgcatacaaagaggtttgtatttgcaccacca
aagggatctgcagcagccgaaacaaatccgagtgagcctctccttgcagcactagaagag
agcagcccgaggtctcttcttcagtatcttgcataccttgatctctgcatggtttgtgag
aataatgttgatgtatggcggagggctgcctttttcgaggaaagtggtgaaacttacaaa
agagtgatagctgtaggcttgaggcctctggaacagcttgcctctaaactgtctgaagct
ttggaaagtattgaaaataattcccaaatatccaatcaattactgtctccaaatgatgct
cgaccagatccaaattgctctgaattgcttaacaacttccagctatatttatggtgtgcc
agaatggttgcattgctaactgcacgctctcaccaagaggacagatatggcgttgctcag
ctctccggtagcaatgcagctgtggtctcgaccttgctctcttgtcttcttgccattgaa
tcattcatggggaggaacatcaatgtacaatcccctaataacttgatgggaccagctggt
ataaagtgggcaacatcaagcatgagaagaccagagattggtaaccgtaaaaagagaggc
ggctttccacattcaaaggcatatgtcattgccgacgctatgaggacatcaatctaccac
attgtgtcagctttccacgacgaaatggtggctagtgcaaaatcaggtcttctagagaaa
gattggatcattaccaacaagcctccatttggcagccgtgatctacttccgcagaagctg
cgcctcttccttgatttccgagctacctaa
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