Cannabis sativa (hemp): 115698505
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Entry
115698505 CDS
T08987
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
115698505
03036 Chromosome and associated proteins [BR:
csav03036
]
115698505
Transcription factors [BR:
csav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
115698505
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
115698505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_box_5
CDC45
Motif
Other DBs
NCBI-GeneID:
115698505
NCBI-ProteinID:
XP_030481443
UniProt:
A0AB40E8K7
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All DBs
Position
8:complement(49092780..49098681)
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AA seq
643 aa
AA seq
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MTDGHLFNNISFGGRGGTNPGQLKIYSGGILWKKQGGGKAVEVDKADIVGVTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVSSLSTYFQSTCGLTPEEKQLSVSGRNWGEVDLNENMLT
FLVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPFTFVVVTLDPPIRKGQTLYPHIVLQFETETVVQSDLSMS
EDLLNTKYKDKLEPSYKGLIHEVFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFMSGKGLKIMNLGNTRPTDGVASVLQDEDDDAVDPHLVRVKNEAGDDESDE
EDEDFVAEKDDSGSPTDDSGEDDSDASVSGGEKEKPVKKDTKKEPSSSKASSSKKKSKDG
DEDGPKKKKQKKKKDPNAPKRALSGFMFFSQMERENVKKTNPGISFTEVGRVLGDKWNKM
SVEEKEPYEAKARQDKKRYKDEISGYKNPQPMKVDSGNESDSE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggtcatctcttcaacaatatctccttcggaggccgaggaggcactaatcca
ggccagctgaaaatatattctgggggaattttgtggaagaaacaaggtggtggtaaagct
gttgaagttgataaagctgacattgtgggggtaacatggatgaaggtcccaagaacaaat
caacttggtgttcggatcaaagatgggttgtactacaagttcactggatttcgtgaccag
gatgtctctagtttatccacttattttcaaagtacttgcggacttactccagaggaaaag
cagctttctgtaagtggccgtaactggggtgaagttgatttaaatgagaatatgctgact
tttctggttggttcgaaacaagcatttgaggtatctttggcagatgtctcacaaacccaa
cttcagggaaaaaatgatgttatcttggagtttcacgtggatgatacaacaggagcaaat
gagaaagattcgttgatggagattagttttcacatacctaattccaacactcaatttgtt
ggtgatgaaaaccgccctcctgcccaggtatttcgtgacaaaattatgtcaatggcagat
gttggtgctggtggtgaagacgctgttgttacatttgagggtattgctatcctcacacct
agggggcgctacagtgtggaacttcatctgtcatttctgcggttgcaagggcaggcaaat
gacttcaaaattcagtatagcagtgttgttcgcctgtttttgcttcccaagtccaaccag
ccatttacatttgttgttgttactcttgatcctccaattcgtaaaggacaaactttgtat
ccacatattgttttgcagttcgaaactgaaactgtagttcagagcgacctatcaatgagc
gaggatctcttgaataccaaatataaggacaagttggaaccatcttataagggactcatc
catgaggtattcaccacagtattgcgtggcttatctggcgctaaagttacaaaaccagga
aagttccgtagttgtcaagatggatatgcagttaaatcatcactaaaagctgaagatgga
gtcctctatccccttgagaagagcttcttttttctacctaagcctcccacccttattctt
cacgaggagattgactatgtggaatttgaaaggcatgctgctggtggctcaaatatgcat
tacttcgatcttcttattagacttaaaacggagcaagaacatctttttcgaaacattcag
aggaatgagtaccataatctttttgacttcatgagtggaaaaggtttgaagatcatgaat
ttgggaaatacaagacctacagatggtgtggcatctgttcttcaagatgaggatgatgat
gctgtcgatccacatcttgttcgtgttaagaatgaagctggcgatgatgaaagtgatgaa
gaggatgaagattttgttgccgaaaaggatgattccggttccccgactgatgattctggg
gaagatgattctgatgctagtgttagtggaggggagaaagagaagcccgtaaaaaaggat
acaaaaaaagaaccttcatcttctaaggcatcttcttccaagaagaaatctaaagatgga
gatgaagatgggccgaagaagaaaaaacagaagaagaaaaaggatccaaatgcacccaaa
agagcattgtctggcttcatgttcttctcacaaatggaaagggagaatgtgaagaaaact
aaccccggaatttccttcactgaagtgggaagagttttaggagataaatggaataagatg
tcagtggaagagaaggaaccctatgaagccaaggctcgccaagataaaaaacgctacaag
gacgaaattagtggatacaagaacccacaaccaatgaaggtagactcagggaatgaatca
gactcagaatag
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