Cannabis sativa (hemp): 115698551
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Entry
115698551 CDS
T08987
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115698551
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
115698551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
zf-RING_11
zf-RING_16
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
115698551
NCBI-ProteinID:
XP_030481500
LinkDB
All DBs
Position
8:44840441..44851633
Genome browser
AA seq
1801 aa
AA seq
DB search
MSYQQPSGFGPVAWSQRGIGLTNTIHSEVAPCLPLPSLPVFCGASDPELSLFDVPNRNSF
WALDRSEVLAQSGKIADLLRQTDVSYLNLREDSRAVSYGYLEPLNLHDEVLRFNPEAFDL
SDPGPLKDQISAGTVPEKTFEPALPIPSHDQRGVTTRSRLFSEAPAHDVSMSSSRKTRAK
KKVTENTSTSVEPDPTEIQDAVISSFCELVDDFCGKAEIFGDDQDEAEWLSLPLSDIRDI
VNEIMSIRTKKLLHLLPVESLVRLLTVLDQQIHRSEGLSINDYEHSDSDVFSSIFCALES
IHAVLAVMAHNEMPKQLYKEEIIERVLEFSRHQIADIMCAYDPSYRAIHRPNDNGTVEAE
EDEDDDPEFGSATKRRRSAKTVKVKRSAVNKVSASVNTMLQKMCTILGLLKDLLMMEKLS
DSCILQLVKTSFTTFLVDNIQLLQLKAIGLLSGIFYSYSQHRTYVIDELLQLLCKLPMSK
RALRAYHLPDEEQKQIQMITALLIQLVHCSSNLPETLRQTSNGNPMLELSLEANYPTKCL
EAATEACCLFWTRVLQRLANLKAQEASELKLMMENLVTDLLTTLNLPEYPGSAPILEVLC
VLLLQNAGPKSKDITARSMAIDILGTIAARLKRDALFCSKEKFWILQEIDRKDETEENDQ
KDECAICLEGKVERLFLMCQDCQRMFHADCLGVKENDISNRGWHCQICVCRKQLLVLQSY
CKSHCKNDGKKDKNRTEKKSDSSFSITEPEIIQQLLLNYLQEASSADDAHLFVRWFYLCL
WYKDDPNSEQKLMYYVARLKSNEIVRDSGSVSSLLKRDLVKKVTLALGQNNSFSRGFDTI
LNMLLVGLREHSPVIRAKALRAVSIIVEADPEVLRDKRVQLAVEGRFCDSAISVREAALE
LVGRHIASHPDVGLQYFDKVAERIKDTGVSVRKRAIKIIRDMCTSNPNFSEFTRACIEII
SRVGDEESSIQDLVCKTFYEFWFEEPSGSQMQGYGVGSSVPLEVARKTEQIVEMMKRMPN
HQYLVTVITRNLVLDFFPQSAKAIGINPQSLASVRKRCELMCKCLLERILQVEEMSGQEI
EMRGLSYVLVLHSFCTVDPTICAPASDPSQFVVTLQPYLKSHSDNKAVAKLLESIIYIID
SVLPLLRKLPQSVIEELEQDLKHMIVRHSFLTVVHACIKCLCAVSRIAGKGATVVEYLIQ
VFFKRLDALAVENKQQVGRSLFCLGLLIRYGHSLLSSSGNRVVDVAHSINLFKKYLHMDD
FVLKVRALQALGFVLIARPEFMLEKDIGKMLEVTLSSSSDDRIKMQSLQNMYEYLLDAES
QLGADAVDNKTVHYSVEGGQVVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNEQIRQTA
LKIVEVVLRQGLVHPITCVPYLIALETDPLEVNSKLAHHLLMNMNEKYPAFFESRLGDGL
QMSFLFTQSISSSSGHVNATKPSSNAKGKTDPASLTQARLGVSRIYKLIRGNRISRNKFM
SSIVRKFDNPNWSTSVIPFLMHCTEVLALLPFTLPDEPLYLIYAINRVIQVRAGALEAKL
KALSLHLSQRVASRENGKVRDESSAQPIIHNEMAYMNMSETNYEEVASHNHMFLVDLNGT
VKPEPEDGKVTSDQGESSGISKEEEQMIQPDCLCAIALQLLLKLKRHLKIVYSLNDARCQ
AFSPNEPLKAGDVFSRQSIPFNISDTRTTLPTTYQELVEIYQDFKNALKEDTVDYSTYTA
NIKRKRPTPRKVRKAAVPLPMTRGGDDDDDDDDDDDDWAGGGRRLSSSGRKAVNTRSRVR
L
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcagcaaccctccggctttggtcccgtggcctggagccaacgcggcatcggt
ctcaccaatactatacactctgaggttgcgccatgcttgcctttgccttctcttcccgtc
ttctgtggtgcttcagaccccgagctcagtttgttcgacgtgccaaatcggaatagtttt
tgggcgttggatcggagtgaagttcttgctcagtcgggtaaaattgctgatctgcttcga
caaactgatgtttcttacttgaacctcagagaggactccagagcagtttcatatggttat
ttggaaccattaaatcttcacgatgaagtgcttagattcaatccagaagcatttgactta
agtgatccaggtcctctcaaggaccagatctctgctggtacagtacctgagaagaccttc
gagccagcattacctattccaagtcatgatcagaggggtgtcacaactcgcagtcgtctg
tttagtgaagctcctgctcatgatgtatcaatgtcatcttctagaaaaacaagagccaag
aagaaagtcactgagaacacttcaacatcagttgaacctgatccaactgagattcaagat
gctgttattagcagtttttgtgaattggtggatgacttctgtggcaaagctgaaatattt
ggagatgaccaggatgaagcagaatggttatccttgcctctttctgatattagagacatt
gtaaatgagataatgtctattcgtacaaagaaacttctacatttgcttcctgtagagagt
cttgttagacttttgacagttttggatcagcaaatacatcggtctgaaggcttgtccatt
aatgattacgaacattctgattctgatgtcttttcatcaattttttgcgcgctcgagtcc
attcatgccgttctggcagtgatggctcataatgagatgccaaagcaactatataaagaa
gagataattgaaagagttctcgagttttcccggcatcagattgcagatatcatgtgtgct
tatgatccatcataccgtgctattcatagaccaaatgataatgggacagttgaagctgag
gaagatgaagatgacgatcctgagtttggctcagcaacgaagagacgacgttctgctaag
actgttaaagtgaagagatcagcagtaaacaaggtttctgcttctgttaataccatgctt
caaaagatgtgcactattcttggcttgcttaaagatttgttgatgatggagaagttgtca
gatagttgtatcttacaattagtgaaaacaagctttacgacattcttagtggacaatatt
cagctcttgcaactcaaggcaattggtttgcttagtgggatattctattcatactcacaa
cacaggacttatgtgatagatgaattactacagctcctttgtaagttgccaatgtccaag
cgagctttgagagcctatcacttacctgatgaggaacaaaagcagattcagatgataact
gctttacttattcagttggtccattgtagttcaaaccttcctgaaacattaaggcagaca
tcaaatggtaatcccatgttggaattatcacttgaagctaactatccaacaaaatgtctt
gaggccgctactgaagcatgctgtttattttggactcgtgtacttcagcgccttgctaat
ttgaaagctcaggaagcatctgagttgaaattaatgatggaaaatcttgttactgatctg
ctgacaacactaaaccttccagaatatcctggttctgcgcctattttagaggtcctttgc
gtattacttctccagaatgctggcccaaaatccaaggacattactgcacgttctatggcc
attgatattcttggtacaattgctgcaaggttgaagcgtgatgctttattttgcagcaaa
gaaaaattttggatattacaggagattgacaggaaagatgagactgaagagaatgatcaa
aaagatgaatgtgctatttgtttggaagggaaagttgaaagattgtttttgatgtgccaa
gactgccaaagaatgtttcatgctgattgcttgggagtaaaagaaaatgacatttctaac
aggggatggcattgccagatatgcgtttgcaggaaacaacttcttgttttacagtcctac
tgcaagtcacattgcaaaaatgatgggaaaaaggataaaaatcgaacagagaaaaagtct
gactcttctttttctattacagaaccagagattattcagcagttacttttaaattacctt
caagaggccagctcagctgatgatgctcatctctttgttcgctggttttatctctgcttg
tggtacaaggatgatccaaattcagaacagaagttaatgtactacgttgctagactaaag
tcaaatgaaatagtgcgagattctggctctgtttcgtcattattgaaaagagatttagtc
aagaaggttactttagctttgggacaaaacaattctttctccagagggtttgatacaatt
cttaacatgcttttggttggtttaagggagcattctcctgtaataagagctaaggctttg
cgagcggtcagcatcattgtagaagctgatcctgaggtactacgtgacaaacgtgtacaa
ttggcagttgaaggaagattctgtgattctgcaatatctgtaagagaagcagcattggaa
cttgttggcaggcatattgcctcgcatcctgatgttggtttgcagtattttgacaaggtt
gcagaaagaatcaaagacactggagttagtgtcaggaaacgagctatcaaaatcattcgt
gatatgtgtacttcaaatccaaacttctctgaattcaccagagcttgcattgagatcatt
tcacgggttggtgatgaagaatcaagcatacaggaccttgtttgcaagacattttatgag
ttttggtttgaagaaccttctggttcacaaatgcaaggctatggagttggaagttctgtt
ccattggaggtggccagaaaaactgagcagattgttgagatgatgaagaggatgccaaac
catcaatatctggtcactgtcattacacgtaacttagtgcttgatttttttcctcagtca
gctaaagcaattggtatcaacccacagtcacttgcatcagttcgtaagcgctgtgagtta
atgtgcaagtgcttattggaaagaatattacaggtggaggaaatgagtgggcaggaaata
gaaatgcgtggactttcatatgtactggttttgcattcattttgcactgtagatccaaca
atatgtgcaccagcttcagacccttcacagtttgtggtcactcttcagccttatcttaag
agtcattctgataataaagcggtggcaaagttattggagagcataatctatatcattgat
tctgtgctccctttacttcgaaagttacctcaaagtgttattgaagaactagagcaagac
ttgaagcatatgattgttcgacattccttcttgactgttgtccatgcttgcatcaagtgc
ctatgtgctgtgagtagaattgctggaaaaggtgctactgtagtagagtatctcattcag
gttttcttcaaacgtttagatgctttggcagttgagaacaagcagcaggtgggccggtct
cttttctgtcttggattgctcattcgatatggccattctttgttgagtagctccggtaat
agagtggttgatgtagcacacagtatcaacttatttaaaaagtatcttcatatggatgat
tttgtgctaaaggttagagcgttgcaggcattaggctttgttctaattgcaaggcctgaa
ttcatgttggaaaaagatattgggaaaatgttagaggtgaccctgtcatcaagctctgat
gatcgcattaagatgcaatcactgcaaaatatgtatgagtatcttcttgatgcggaaagt
caattgggagcagatgctgttgacaacaagacagtccattactctgtagaaggtggtcaa
gtggtacctgttgctgctggtgctggagatactaatatctgtggtggtatagttcagttg
tattgggataacatattaggaagatgtttggattttaatgaacaaattcgccaaactgct
cttaagattgttgaagttgttctgcgccaaggtcttgttcatccaattacgtgtgttcca
tacctcatagcattagagacagatcctttagaagtgaactcaaagttggctcatcattta
ctcatgaatatgaatgaaaagtaccctgcgttttttgagagccgcttaggggatggcctt
caaatgtcttttctatttacacaatccattagctcgagttctgggcatgtgaacgccacc
aaaccttctagcaatgcaaaggggaaaactgatcctgcttctttgactcaagcaaggcta
ggagtttctcgtatctacaagcttattcgcggaaatcgaatttcaaggaacaaatttatg
tcatctattgtccgcaaatttgataatccaaattggagcacttctgtaatacctttcttg
atgcactgcacagaagttctagccttgctaccatttacattacctgatgaacccctctat
ttgatttatgctataaatcgagtaatacaagttagggctggtgccctcgaagcaaaactg
aaagctttgagtttgcatctttcacaaagagttgcctctcgtgagaatggaaaagttaga
gatgaatccagtgcccagcctattattcataatgagatggcttatatgaacatgagtgag
acaaattatgaagaggtagcatctcataatcatatgtttttagtggatttgaatggtaca
gtaaaaccagagccggaagatgggaaagttacctcagatcagggtgaatcttctggcata
tcaaaagaagaggagcagatgatccagccggattgtctgtgcgctattgccttgcagctt
cttctgaagttaaagagacaccttaagattgtttatagcttgaatgatgcacgttgtcag
gctttttctccaaatgaaccccttaaggctggagatgtattttccaggcaaagcattccc
tttaacatcagcgacacacggacaaccttgcccacaacctatcaagaattagtagaaatt
tatcaggatttcaaaaacgcacttaaagaagatactgttgattactcaacttacacagca
aacataaagaggaaacgcccaacccctagaaaagtgaggaaagctgctgtgccactgcca
atgaccagaggaggagacgacgatgatgatgatgacgacgacgacgatgattgggctggt
ggaggtcgaaggctgagtagtagtgggaggaaagccgttaacaccaggagtagggtccga
ttatag
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integrated database retrieval system
