Cannabis sativa (hemp): 115698600
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Entry
115698600 CDS
T08987
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115698600
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115698600
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
115698600
NCBI-ProteinID:
XP_030481574
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All DBs
Position
8:64350968..64361683
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AA seq
1353 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILSTDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEFQGNYVDHHVSARDQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGFDLDEDIF
LDKVAAQTNDGIPDDDLQVSAPPMTPEEKEEMREDIEGLPGTTEIMDLDGAGDQIEVPDA
NIEAFDHAAEDPSTPGFMEHPSPSKAEEPMNFDGHMESKDLNFDGHMESKDLNFDGHMAS
KDLNFEGHLESKDHDFTTFEGPEDTENAVSKCDAHETIAPLENGCLSSDVEMQQANLQLH
LASIPVTTENSHLASIPVTTENSHLSSIPVTTENISADNGVSAPSAVVEHDKPIPLAPEC
SNGNNSAVGGPIRVEEIHNGVVIDERTRHTGTNVQFPQSPGARLDETVASPSCSQVTTEL
EDPGRQTLSIDVETHNMGESCSLNNALLTNVVCPPESPGRPEVVNVEGQTSQEPKETNTL
SHFTHDFMASNNYPGLHACTQKGPDMSSFGGNESHSIDLMRQETGNNFTLSHFTHDFMAS
NNFPGLRGCTQKEPDMSYFGGDQSHSIDHMGRDTVNKHLPEPALCEETPVDRRQLNLEMH
NVASRDIQLENFNRSAASDLPAPERLLFVSEGHFSKPNDLFMESTPRVDEIGGGIKLTAG
QKRSFTESTLTVHSLNSSDSFNMTKFMRTAESVPDDNDLLSSILVGRKSSVLKMKPTPPV
PEKKPKRPRSTPRASAKKRKVLMDDMMVLHGDIIRQQLTSTEDIRRLRKKAPCTSQEISL
IQRQFLEEEIFNQPSFTGMSTALIFLHHEKFDLTGLRVYENDPYNGPVEPAKDVVEPSVL
VQRNLETQTVNIPIQSEIQHTAVLVQSDFETQTVNIPIQSEIQHTGNSDFRSQHEKMGLG
VQNSEVVADAANHSINRIESSIQIKLNSIDIANNMTENTVQADLVDKSNDVDASVLMEAS
CMYPQRFETEPIEETSLADTSNGRLDAIECSVDPEKDNGNLHASLDVASVESEGYDINML
PGSGDQAVEVHENIDLSVMNPDEVQAPEEGCEGKDLASSCMQADGANLDLTLPLEPNVDE
ENASCMQADGANLDLTLPLEPNVDVENASCMQADGANLDSTLPLEPIVDVENAPLNEEEN
TDVKESDLPSALNEEATTAEDSAVELRDDYEEDVLYDNDTEFLNVDDDDVEEDYDDDNLP
GAEDPRLLENSGWSSRTRAVAKYLQTLFDKESVPGKRVLPMDNLLMGKTRKEASRMFFET
LVLKTKDYIDVEQAMPFDNINVKPRIKLMKSDF
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgttttactctcagtttatattggccaagaaaggtcctcttgggacgatatggattgcg
gctcatttggagaggaagctccgcaagaatcaggttgcagataccgatatcggagtttca
gtggattcaattctgtcaactgatgttcctatagcactccggttgtctagccatctttta
cttggagttgttaggatatattcaagaaaggtgaattaccttttcgatgattgcagtgag
gctttgcttaagataaagcaagcttttcgttccactgctgttgatttgcctccagaagaa
tccactgcaccatatcattccatcaccttgccagagacttttgatcttgatgattttgag
ctcccagataatgaatttcagggtaactacgttgatcatcacgttagtgcaagagatcag
attacacttcaagataccatggaaggtgttgtttactcaacatctcagttcggattggat
gagcgatttggcgacggtgatacttctcaaattggttttgacctagatgaggacattttc
ctcgacaaggttgctgcccaaacgaatgacggaattccagatgatgatctgcaggtgtca
gctcctccaatgacacctgaagaaaaagaggaaatgcgtgaggacattgaggggttgcct
ggaactacagaaataatggatttggatggcgctggggaccagattgaagttccagatgca
aatatagaagctttcgaccatgctgctgaggatccatctactcctggattcatggaacat
ccaagcccgtctaaggctgaggagcctatgaactttgatggtcacatggaatcaaaagat
ctgaactttgatggtcacatggaatcaaaagatctgaactttgatggtcacatggcatca
aaagatctgaactttgagggtcacttggaatcaaaagatcatgattttacaacatttgaa
ggcccagaagatacagaaaatgctgttagtaagtgtgatgcccatgaaactattgctcct
ttggagaatggctgcctttcaagtgatgtggagatgcaacaggcaaatttgcagcttcat
ttagcatctattccagttactacagagaacagtcatttagcatctattccagttactaca
gagaacagtcatttatcatctattccagttactacagagaacatctctgcagataatggg
gtttcagcaccatcggctgttgttgagcatgataaacctattcctctagctccagagtgc
tcaaatggaaacaatagtgcagtgggcggtccaatcagggtggaagaaatacacaatggt
gttgttatagatgaaagaactagacacaccggaacaaatgtacaattccctcaatctcct
ggagctagattggatgaaactgttgcatctcctagttgctcccaggtgaccacagaactg
gaggatcctggtcgtcagactttgtcaattgatgttgaaactcacaacatgggagaatca
tgctctcttaacaatgcattgttaacaaatgttgtttgtccacccgagtcacccgggaga
ccagaggttgtgaatgttgaaggtcagacctctcaagagccaaaagaaacaaatactttg
agtcattttactcatgatttcatggcatctaataattatcctggactccatgcctgcact
cagaaaggtcctgatatgtcatcttttggaggtaacgagagccattcaattgatcttatg
agacaggagactggaaataattttactttgagtcattttactcatgatttcatggcatcg
aataattttcctggacttcgtggctgcactcagaaagaacctgatatgtcatattttgga
ggtgaccagagccattcaattgatcatatgggacgggacacagtaaataaacatcttcct
gaacctgcattatgtgaagagactccagttgaccgcagacagttgaatttagaaatgcat
aacgtggcatctcgtgatattcagctagagaattttaacagatctgcagcttcagactta
cctgcccctgaaaggttgctctttgtgtctgaagggcattttagtaaaccaaatgatttg
ttcatggagtccacacctagggttgatgagattggtggtgggatcaaacttacggcagga
cagaaacgtagcttcacggagagtactttgactgtacatagtttaaactcgagtgactca
tttaatatgaccaagttcatgagaactgcagaatccgttccggatgataatgatttgctg
tcttctatcctagttggaagaaaatcttcagttttgaagatgaagcccactccacctgta
cctgaaaaaaaaccgaaacgccctcggtccactccccgtgctagtgccaagaagagaaaa
gtgcttatggatgatatgatggttctacatggcgatataatacgacaacaattgacaagt
acagaagacatacgtcgcctgcgtaagaaagctccctgtactagccaagaaatttcattg
attcaaagacaattcttagaggaagaaatttttaatcaacccagttttactggtatgtcc
acagcactgatatttttgcaccatgagaaatttgatttgactgggttaagggtgtatgaa
aatgatccatacaatggtcctgttgaaccagcaaaggatgtagtagagccttctgttttg
gtccaaagaaatttggaaacacaaactgttaacattcctattcaaagtgagattcagcat
actgctgttttggtccaaagtgatttcgaaacacaaactgttaacattcctattcaaagc
gagattcagcatactggaaacagtgacttcagatctcaacatgaaaaaatgggacttggt
gtacaaaatagtgaagttgttgctgatgcagcaaatcattctattaaccggatagagtca
tcaattcaaatcaaacttaattctattgatattgccaacaacatgacagaaaacactgtt
caagcagatcttgtggataagagtaacgatgtagatgcttctgtactgatggaggcatca
tgcatgtacccacagaggtttgaaactgagcctattgaggaaacatcactagcggacaca
agtaacgggagacttgatgctattgaatgtagtgtagatcctgagaaagataatggcaat
ttacatgcctcccttgatgtggcatctgtggaatctgaggggtatgatattaatatgctt
cctgggtctggagatcaagctgtggaagtacatgaaaacattgatttaagtgttatgaat
ccagatgaggtccaggcaccagaagaaggatgtgaaggcaaggatttggcttctagctgt
atgcaagctgatggagcaaacttagatttaactctacccttagagccaaatgtggatgaa
gagaatgcaagctgtatgcaagctgatggagcgaacttagatttaactctacccttagag
ccaaatgtggatgtagaaaatgcaagctgtatgcaagctgatggagcgaacttagattca
actctacccttagaaccaattgtggatgtagaaaatgctcctttgaatgaagaagagaat
acagacgtgaaggaaagtgatctaccgagtgccttaaatgaagaagcaacaactgctgag
gattctgcagtggagcttcgtgatgattatgaagaagatgtcttatacgataatgacaca
gaatttttgaatgtagacgatgatgacgtagaagaagactacgatgatgataatttgcca
ggtgctgaagatcctcgtcttcttgaaaacagtggatggtcttctcgaacgcgggccgtt
gctaagtatctccaaaccttatttgataaggaatctgtgcctggaaagagagttctccca
atggacaatctattaatggggaagactcgcaaggaagcatcaaggatgtttttcgagaca
ctggttctaaagacaaaggattacatcgatgtagagcaagcaatgccgtttgacaacatc
aatgtaaagcctagaataaagctcatgaaatccgacttctga
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