Cannabis sativa (hemp): 115698648
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Entry
115698648 CDS
T08987
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115698648
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115698648
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
115698648
NCBI-ProteinID:
XP_030481638
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Position
8:36743200..36746307
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AA seq
459 aa
AA seq
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MSMLKRRSLSLIIIAFMIASLVWCSCLKPCHARQWNLNIPTWTKNNYHKIAPVEKLSGTT
TGNAAVFNVLNYGAKGDGRADDTKAFEAAWAAACKVKASTIIVPSGSVFLVKPISFSGPN
CQSDIVVQLDGKIIAPTGSASWGSGLLQWIEFTKLQRITIKGKGVIDGQGSVWWNDSPTY
DPTQDLEESKSGKMPGTKPTALRFYGSNGVTVTGITIQNSPQTHLKFDDCTNVQVSSVSV
SSPGNSPNTDGIHLQNSRDVTIYGSNLACGDDCVSIQTGCSNVYIHNINCGPGHGISIGG
LGKGNTKACVSNVTVRDIKLQNTLTGVRIKTWPGGSGSVQNVMFSNIQVSEVETPIKIDQ
FYCDKSKCSNQTSAVAVRDIHYINIKGTYTKEPVHLACSDSLPCTGVSLNTIQLKSVQAS
QHLSGPFCWKAYGQLETATVPPVDCLKSGATVQAKSESC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttaaagcgaagaagtctatcattgatcataattgctttcatgattgcttca
ttagtgtggtgttcatgcttaaaaccttgccatgctaggcaatggaatctaaatatccca
acatggacaaaaaacaattatcacaaaatagcaccagttgaaaagcttagtggtactact
actggaaacgctgccgttttcaatgttttgaactatggagccaaaggtgatggacgagct
gatgacacaaaggcgtttgaagcagcgtgggcagcagcttgtaaagtgaaggcttcgaca
ataatagttccatcagggtccgtgttccttgtcaaaccaatctcattctctggtcctaat
tgtcaatcggacattgtagttcagttggatggcaagattatagctccaacgggctctgca
tcatggggttcaggtcttctacagtggattgagtttacaaagctacaaagaatcacaatt
aaaggaaaaggtgttattgatggacagggctcagtttggtggaatgactctccaacatac
gaccccacacaagatttggaggaaagtaaaagtgggaaaatgccaggcaccaaaccaacg
gctctgaggttctatggaagtaatggtgtgacagtaactgggataacgattcaaaacagc
cctcaaacacatctaaaattcgatgattgtactaatgttcaggtctccagtgttagtgtt
tcttcccctggtaacagcccgaacacagacggtattcacttgcagaactctcgtgatgtg
accatctatggcagcaatcttgcatgtggagacgattgtgtatctatacaaaccggatgc
tcaaacgtgtacatacacaatatcaactgtggacctggacatggaatcagcattggtggc
ctagggaagggcaacaccaaagcttgtgtgtcaaatgtcactgtcagagatatcaaatta
caaaacacattaactggtgttagaattaaaacatggccgggaggatcaggctcagtacaa
aatgttatgttctctaacattcaagtatctgaagtggaaacacctatcaagattgaccaa
ttttattgtgacaaaagcaagtgttcgaatcagacctcagctgtggctgttagagacata
cattacataaatattaaaggaacttacacaaaggaaccagtgcatttagcttgcagtgat
agtttgccctgcactggagtatctttgaacaccatacagctgaaatcagtccaagcaagt
cagcacttatctggccctttctgttggaaggcatatggacagcttgaaactgccactgta
cctccggtagactgcttgaagtccggggctacagttcaagctaagagtgaatcttgctga
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