Cannabis sativa (hemp): 115698762
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Entry
115698762 CDS
T08987
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115698762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115698762
03012 Translation factors [BR:
csav03012
]
115698762
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115698762
Translation factors [BR:
csav03012
]
Eukaryotic type
Release factors
115698762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
115698762
NCBI-ProteinID:
XP_030481794
LinkDB
All DBs
Position
8:complement(45172545..45174894)
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AA seq
437 aa
AA seq
DB search
MADGQESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKHSTTGEIIVKHLNKDQDNVQSHFRD
PATSAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDELSDDGEVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcaagaatcagataagaacattgagatatggaagattaagaaactgatc
aaggcgttagaatctgcaagaggcaatggtaccagcatgatttctcttataatgcctccg
cgggatcaaatttctcgggttactaagatgcttggcgatgaattcggaactgcttccaac
atcaagagtagggtcaatcgccagtctgtgttgggtgccattacatctgcacagcaaagg
ctgaagctttataacaaggttcctcctaatggtcttgtgctatacactggaacgattgtc
accgatgatgggaaagaaaagaaggtgacaattgactttgaacctttcaagcctataaat
gcttcattgtacctttgtgacaacaagtttcataccgaagctcttaatgaacttttggaa
tccgatgataagtttgggtttattgtgatggatggaaatggtaccttatttgggacatta
agtggaaacacaagagaggtgctacataagttcactgttgatttgccaaagaagcacggt
agaggaggtcagtcagcacttcggtttgctcgtcttaggatggaaaagcgacataactat
gttagaaagactgctgagcttgccacacagttctacatcaatcctgctactagtcagcct
aatgtttctggtctaattcttgctggttcagcagatttcaagactgaactgagccaatct
gatatgttcgatcctcgtttgcaggcaaagatattgaatgtggttgatgtttcttatggg
ggtgagaatggtttcaatcaagctattgagttatctgctgaaattttatccaatgtaaag
tttattcaggagaagcgcttgattggaaagtatttcgaggagataagtcaggacactggt
aagtatgtctttggtgtagatgacacactgaaggcactcgaaatgggtgctgtagaaacc
cttatcgtgtgggaaaatctggatattaacaggtatgttctgaaacacagtactaccggt
gagattatcgtgaagcatctgaacaaggaccaagataatgtccagagccatttccgtgac
ccagctacttcagcagagcttgaagttcaggagaagatgccattacttgagtggtttgcc
aacgagtacaagaggttcggttgtacactcgaatttgtaactaacaaatcccaggaagga
tcacaattttgcagaggatttggtgggattggaggtatccttcgataccaacttgacatg
agatcattcgatgagctatcagatgatggagaagtatatgaagattctgattaa
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