Cannabis sativa (hemp): 115698835
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Entry
115698835 CDS
T08987
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
115698835
Transcription factors [BR:
csav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115698835
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
115698835
NCBI-ProteinID:
XP_030481891
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Position
8:38731969..38734715
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AA seq
585 aa
AA seq
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MLPNMADQETIIPNGFSQINPLLQGSNNNNNNINPPPLKKKRNLPGTPDPEAEVIALSPK
TLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPKKRVYVCPEKTCVHHH
PSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGAREYKCDCGTLFS
RRDSFITHRAFCDALAEETARVKAASDMNIINPIMGAAAAGNLAYHFISGPNNNFNNMTQ
HFPSVFKPIISSSSSASPNDNHHHEAARSQQLSLWMSDQHDQTLLISSPNNNSDALFHDH
HQIRHHHHQHQHQLGNSSTVSSASEIFGTSTTTDNNPLVSCTTSSSNLPPPSEYHHQQQQ
QQLNWVFGSGNTTNTNTNNKMSSNSNTNTTTTINHHHHHHELAMAMNKEGGGGSSAQLVT
VPSLYSNQLSTPSAAANMSATALLQKAAQIGATSSVDSSFLGSFGLKCNNNSNSSTITTQ
LQDGNNINKLCGLYGSTTPILRVVSNNNNNNNNNVDNPEGEIFQIYPPAAKRRYVQMSSN
TDQDQAGGQTRDFLGVGSGGGGGGGVQTICHPAAATAAASINGWI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaaacatggctgatcaagaaacaattattccaaatgggttttcccaaattaac
cctcttcttcaaggatctaataataataacaacaacatcaaccctcctcctttgaaaaag
aagagaaaccttcccggaactccagatcctgaagctgaggtgatagccttgtcgccgaag
actttaatggcgacgaacagattcttgtgtgagatatgtgggaaagggtttcagagagat
cagaaccttcaactccataggagagggcacaacctgccatggaagctgaagcagcgaagc
agtaaagagcctaagaagagagtttacgtttgccctgaaaagacatgcgtacaccaccat
ccttccagggctttaggagacttgactggtattaagaagcacttctgtagaaaacacgga
gagaagaagtggaagtgtgagaagtgttcaaagagatatgccgtacaatccgactggaaa
gcccactctaagacttgtggagctagagagtacaaatgtgactgtggaactcttttttca
cggcgagacagtttcataactcacagggcattctgtgatgcattagctgaagaaacagca
agagtaaaagcagcctcagacatgaacataataaatccgataatgggagcagcagcagct
ggaaacctcgcttatcatttcatttcaggaccaaataataattttaacaacatgacacaa
cattttccctctgttttcaaaccaataatatcatcatcatcatcagcatcacccaatgat
aatcatcatcacgaggccgcaagaagccaacaactatctctatggatgagtgaccagcat
gatcaaacactacttatctcatcaccaaacaacaacagtgatgccttattccacgatcat
catcaaattcgtcatcatcatcaccaacatcaacatcaacttggtaattcgtcgacagtg
agttcagctagtgaaatatttggtactagtaccactactgataataatcctcttgtatcg
tgtactacttcatcatcaaatcttcctccaccgtctgagtatcatcatcaacagcaacaa
caacagttgaattgggttttcggaagtggtaatacaacaaatactaatactaacaataaa
atgtcctccaacagtaatactaatactactactactattaaccatcatcatcatcatcat
gagctggccatggccatgaacaaggaaggaggaggtggatcatctgctcagctagttaca
gttccttccttgtacagcaaccaactcagtacaccttccgcagcggcaaacatgtccgcc
actgctttactgcaaaaagcagctcaaataggagcgacttcgagtgttgattcatctttc
ctcggaagttttgggttgaagtgcaataataatagcaatagcagtactataacaactcaa
ctccaagatgggaacaatattaataaattgtgcggtttgtatggatcaactaccccaata
ttgagggtagttagtaataacaacaacaataacaataataatgtagacaacccggaaggt
gaaatattccaaatttatcctccggcggccaaacgcaggtatgttcagatgagtagtaat
acagatcaagatcaggcaggagggcaaactagggatttcctaggcgttggaagtggaggc
ggtggcggcggaggagttcaaaccatttgccacccggctgcagcaacagcagcagcatca
atcaatggttggatttga
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