KEGG   Cannabis sativa (hemp): 115699119
Entry
115699119         CDS       T08987                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115699119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csav04121]
    115699119
   03036 Chromosome and associated proteins [BR:csav03036]
    115699119
Enzymes [BR:csav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115699119
Ubiquitin system [BR:csav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115699119
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     115699119
    Noncanonical PRC1 (PRC1.1)
     115699119
    Noncanonical PRC1 (PRC1.3/1.5)
     115699119
    Noncanonical PRC1 (PRC1.6)
     115699119
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 DUF3337 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-UDP zf-Nse zf-RING_6 zf-C3HC4_5 zf-RING_11
Other DBs
NCBI-GeneID: 115699119
NCBI-ProteinID: XP_030482222
LinkDB
Position
8:complement(39190454..39194911)
AA seq 500 aa
MPAQKRCSPEKPHDHEDDDDAEPALHPRPKQSRSGAHPKDDPELILQRHEEQEESLDEET
EEEDAEGEEQVKQQASDDDDEDDDEDEDEEDSEGTPSSSSQLKPEFVSVELPEIRKDVQC
PICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSLRDDPNYDALIA
ILYPDIEKYEEEELAFHEDERTRNKQIQASIAQIFQRQSEALIKRRTLGKDTPDTYTART
QRNHRNSYSRRRNSRAVELQESEDNEERNDNNIGKGESSNDENHIETRHRRRKRRAGTRS
SQPSSSVANSDGNTENDFEVNGERRGISPVIAWNSEMLAWGRGGARSNTRHGNAGGCNNK
SSRNTRLTKLVDYLHSLEENSDELDVHLVLISLDKQSTPSLQQSHLCCRPSLSVKHLCEY
VAHQTLLKAEEVEFLVVKGQKSIFKDDKTASMTDSTSLVVDPCRDDLQVLEAEETLAGVK
AHCSSSPDHMILGYRRKGGV
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgcctgctcagaagcgttgttccccggaaaaaccccacgaccacgaagatgacgacgat
gcagagcccgcgcttcatcccaggcccaagcaatctcggtccggagcccaccctaaggac
gacccggaacttattttacagcgccatgaagagcaagaagagtcacttgatgaggaaact
gaagaagaagatgcagaaggagaagaacaagtgaaacaacaagcgtcggacgacgacgac
gaagacgatgatgaggatgaagatgaagaggattccgagggaactccatcttcgagctct
cagctgaaaccagaatttgtctctgtagaactgccagaaatacgtaaagatgtgcaatgc
ccgatttgtcttggtatcattaagaaaacacgtactgtaatggaatgcctacacaggttt
tgcagggaatgcattgacaaatcaatgcgaatggggaacaatgagtgccctgcttgccgg
acacattgtgccagtcgacgttccctgagagatgacccaaactatgatgcccttattgct
attttatatccagatattgagaagtatgaggaggaggaattagcatttcacgaagacgag
aggactagaaataagcagattcaagcatcaattgcccaaatatttcaaagacaatctgaa
gctttaattaagagacgcacacttgggaaagacacaccggatacatatacagcaaggaca
cagcgcaaccatcggaattcttattcaaggagaagaaatagccgagctgttgagcttcaa
gaatctgaagacaatgaggaaagaaatgataacaatatagggaaaggtgaatcttcaaat
gatgagaatcatatagaaaccagacatagacgacgcaagagacgagcaggtactcggtct
tctcagccttcgtcatcagtggccaattcagatggaaacactgaaaatgactttgaggtg
aatggagagagacggggaatttctcctgttattgcatggaactctgaaatgcttgcttgg
ggcaggggtggtgcccgtagtaacacccggcatggaaatgctggtggttgcaacaataaa
agttctcgaaacactcgtttaaccaaattggttgattaccttcatagcttagaggaaaac
agtgatgagttagatgtacatctcgtgcttatttctttggacaaacagagtacaccaagt
ttgcagcagtctcacctttgctgtcggccaagtttatctgttaaacatctatgtgaatat
gttgcacaccagacacttctgaaagccgaagaagtcgaatttttggtggttaaaggacaa
aaatccatcttcaaagatgacaaaacagcctccatgacagactcaacgtccctggtggtt
gatccatgcagagatgaccttcaagttttggaagcagaagaaacattggctggggttaaa
gcacattgcagttcgagtccagatcatatgatactcgggtatcgacggaagggaggtgtt
taa

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