Cannabis sativa (hemp): 115699159
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Entry
115699159 CDS
T08987
Name
(RefSeq) synaptonemal complex protein 1 isoform X1
Organism
csav
Cannabis sativa (hemp)
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Gene cluster
GFIT
Motif
Pfam:
ERM_helical
Motif
Other DBs
NCBI-GeneID:
115699159
NCBI-ProteinID:
XP_030482280
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Position
X:76427623..76437657
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AA seq
876 aa
AA seq
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MQKLGFPTMRSLDHLKSLTGSVSGTAKTFSFSSRQPTDSISSGSFTNLKITAEKLVKEQA
SVKTDLDMANNKLKKSMEHIRALEEKLQNAFNENAKLKVKQKEDEKLWNGLESKFSSTKA
LCDQLSETLKQLASQVHDAEKDKELFEGKLSANANVLDDLNQLMNGLSLKLDTAEETIKK
REKEFEDLKIEKEEMDKFYRDEQCRTTNLIDEKDAMIKNFETTVAANRLIAESLNSKLSD
VKLELKLKEDHINHLLTLRDNLEKEKSDVQLLKEDLAKRLDTSFLEIKNLEALIHVFSSL
LVEVDKQSLTVLDKFDQLNYLYNSCFKLVQEERDLASKHAKRQYDQLNDKFLLISSEKNA
LQLGNQDLNNKVIELQKVQESIMAQLSEEGNIARERIQNLESEAESLVSKKIESEKLIST
LELQVETLSESSRSSENKLQELLLKFSALENENKDNTEKLQAEMQKKVDEIDILQKEGEK
REEHISLLEKQVEQLRNIIEEKERLILQYKERETKLEEQFTENQVLLATAESRLAEARKQ
YDVMLESKQLELSRHLKELSQRNDQAINDIQKKYEAEKLEIINMEKEKVENITGELEAKC
DKTVAECKEESRQYLMRVQEEHASLVSRIQQDYDRKELSLKANHSEELKRSQLQAEGELK
ERMTTLRKEYEAQMDTLRCQLEDECRKLQDELDLQKSREDQQRALLQLQWRVMGDKLQED
QEVNSKKDYSVSSIHIKNSAGAKRSQHTLVRPDNEEKDSSYLRATQTPVSKMLKKVENPT
AGSVLSIPKHHKKVTHHEYEVETSNGRTITKRRKTKSTVMFEDPRKRKKMNTPKVNTPRN
LIKGVKDGSHLPPPNLGDLFREGSLDPYADDPYAFD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagctagggtttccaaccatgagaagcttggatcatttgaagtcgctcaccgga
tcggtctctggtactgcaaagaccttctcattctcttctcggcagcctacggattcaata
tcttcgggaagctttacgaatttgaagatcactgcagagaaactggtgaaagagcaagct
tccgtgaagactgatctagacatggcgaacaataaactgaaaaaatcgatggagcacatc
cgtgcgttagaagaaaagttacagaatgcgtttaatgaaaatgctaaactcaaggtgaaa
cagaaagaagatgagaagctgtggaatggcttagaatctaaattttcttctacgaaagca
ctgtgcgatcaactctctgaaactttaaagcaattagccagtcaagtccatgatgctgag
aaagataaggagttatttgaaggcaaactgtctgcaaatgcaaatgttcttgatgatttg
aatcagctaatgaatggtctgtctttaaaattagatactgcagaggaaactattaaaaaa
cgtgaaaaggagtttgaagatctaaaaattgagaaagaagaaatggataagttttacaga
gatgaacaatgcagaacgactaatctcatagatgaaaaagatgccatgataaagaacttt
gaaacaactgtagcagctaatagattgattgcagaaagcttgaactctaagttgagcgat
gtaaagcttgagttgaagttaaaagaagatcatattaatcacttgctaaccctgagggac
aacctggagaaagaaaagagtgatgttcaattgctgaaggaggatcttgctaaaagatta
gatacgtccttccttgagataaagaatcttgaagctcttatccatgtgttcagttccctg
ttggttgaagtggataaacaaagtttgactgttttagataagtttgatcagctaaactat
ctttacaactcttgcttcaagttggtccaggaggagagggaccttgctagcaagcatgct
aagagacagtatgatcaacttaatgataagttcttactcatatcatcagagaagaatgca
ttgcagttgggaaatcaggacttaaacaataaggtcattgagcttcagaaagttcaagag
tctatcatggcacagctttctgaggaaggcaatatagccagggagaggatccagaatttg
gagtctgaagcagaaagtctggtctcaaagaagatcgagtcagagaagctgatttccaca
ttagaattgcaagttgaaactctttcggaaagttcaaggtcatcagagaataaactgcaa
gaactactgctaaaattttcagcattagaaaatgaaaataaagataacacagaaaaatta
caagcagagatgcagaaaaaagtcgatgaaatagatattctgcaaaaagagggagagaaa
cgagaggagcacataagcttactggagaaacaagtagagcaacttcgtaacatcatagag
gaaaaggaaaggctcattttgcaatataaagaacgagagactaaactggaagaacaattt
acagagaatcaggtgttgttggctactgctgaaagtagactagcagaagctagaaagcaa
tatgatgttatgttagaaagtaaacagctagaattatcaagacatttgaaagaattatct
cagaggaatgatcaggcaattaatgacatccagaagaagtatgaggcagagaagttagaa
attatcaacatggaaaaggaaaaggtagaaaacattactggagaattggaagcaaaatgt
gataaaacagttgctgaatgtaaagaagaatcaagacagtacctgatgcgtgtccaggag
gaacatgcttctctggtaagtcgcattcagcaggattatgatcgtaaagagctgagtctt
aaagccaatcacagtgaagaactaaaacgttctcaacttcaagctgaaggtgaactgaaa
gagagaatgacaacactgaggaaagagtatgaagcgcagatggacactttgaggtgtcag
cttgaagatgaatgtagaaagcttcaagatgagttggatcttcagaaatccagagaggac
caacagagggctttactgcagttgcagtggagagtgatgggcgataaactacaagaggac
caagaagtaaactcgaaaaaggattactctgtttcctcaattcatatcaagaattctgct
ggtgcgaaaagaagtcaacatactctagtaagacctgacaatgaagagaaggattcttca
tacttgagagcaacacaaacaccggtatcaaagatgttgaagaaagtagagaatccaacc
gcgggaagtgtgttgagtattccaaaacatcataagaaggttactcatcacgaatatgaa
gttgaaacttctaatggaaggacaattacaaaacggaggaaaacaaagagtactgtcatg
tttgaggatcccagaaaacgtaaaaagatgaacactccaaaagtaaacactccaaggaat
cttatcaagggagtcaaggacggatctcatttacctcctccgaacctaggtgatctgttt
agagaagggtctttggatccatacgcagatgatccatatgcctttgattag
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