Cannabis sativa (hemp): 115699226
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Entry
115699226 CDS
T08987
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL33 isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115699226
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115699226
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115699226
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115699226
Spliceosome [BR:
csav03041
]
Common components
Common spliceosomal components
SR proteins
115699226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115699226
NCBI-ProteinID:
XP_030482382
LinkDB
All DBs
Position
8:20270933..20273861
Genome browser
AA seq
206 aa
AA seq
DB search
MRGRSYSYSPSPTRGYSSRRRRSPSPRGRYGGRDRDLPTSLLVRNLRLDCRPEDLRGPFE
QFGPLKDIYLPKDYYTGEPRGFGFVQFIDPADAADAKYHMDGQVLRGRELTVVFAEENRK
KPSEMRARERYTRSSSRYSRSPRYARTYSRSPDYYSPSPRRRHYSRSMSPRDRRYRGRSY
SRSPYGSRSHSFSRSRSRSHSLEYSR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtagaagctacagctacagcccttcgcccaccagaggatacagcagtagaagg
cgtcggagccctagcccgaggggtaggtatggaggtcgtgatagagatcttcctactagt
cttttggttcgcaatcttcgccttgactgcaggccagaagatctgcgtgggccttttgag
caatttggtcccctcaaggacatttacttgcctaaggattactatactggggagcctcgt
ggctttggatttgttcaattcatagaccctgctgacgctgcagatgccaaataccatatg
gatgggcaagtgcttcgaggtcgagaattgacagtagtatttgctgaagaaaacagaaag
aagccatctgaaatgagagcaagagagcgttatacgcggtcttcaagtcgctattcccga
tcaccacgctatgcccgaacctattctcgcagtccagactattattccccatctcctaga
cgaagacattactcgaggtcaatgtctcccagggaccgaagatacaggggccggtcatat
tcaaggtcaccttatggttctaggagccacagctttagcaggagcaggagccgcagccac
agccttgagtattctcgatag
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