Cannabis sativa (hemp): 115699244
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Entry
115699244 CDS
T08987
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115699244
Membrane trafficking [BR:
csav04131
]
Protein recycling
Others
EARP complex
115699244
Endosome - Golgi transport
Tethering complex
GARP complex
115699244
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
COG4_N
Vps54_N
MPH2
Motif
Other DBs
NCBI-GeneID:
115699244
NCBI-ProteinID:
XP_030482407
LinkDB
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Position
8:complement(34308459..34320842)
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AA seq
824 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLTGVEPLMQKIHNEIRRVDTEILAAVRQQSNSGTKAKEDLA
AATCAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQHLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPLPWHVPYRLCIQFCKKTRKQLEEILNNMKEKPDV
GTLLLALQRTLEFEDELAEKFGGGAQGKETGNDIEEIGRGETGQNVSDIRKKYEKKLAAH
QENGSEEKKGNKELSAPGAGFNFRGIVSSCFEPHLTVYIELEEKTLMENLEKLVQEETWD
IEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFARLPK
GGTGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESISKIIEPNFADTVD
MSEVQDEFSAVITKSLVTLVHGLETKFDAEMAAMTRVPWATLENVGDQSEYVNGINMILT
SSIPVLGGLLSPLYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTILL
EIPTLGRQTSGAASYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRIL
ELKGLKKADQQTILDDFNKHGPGITQPSITPQMVAVAQPAPSHAIASLMPSSASIGLIAS
REDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtctagtgctttggagtacatcaaccagatgttccccacagaggcatctttg
actggtgttgaaccacttatgcaaaagatacataatgagattcgacgagtggatactgaa
attttagcagctgttcgacagcagagtaattcagggactaaagcgaaggaagaccttgct
gctgctacatgtgctgtggaagaactcatgtataaaatccgagaaataaaaaccaaagct
gagcaaagtgagacaatggttcaagagatatgtcgtgacattaaaaagttggacttcgca
aagaagcatataacaacaacaattactgctcttcatcgccttaccatgttagtctctgct
gttgagcagctccaagtaatggcttcaaagagacaatacaaggaggcagctgcacaatta
gaggctgtgaaccaattgtgtagtcattttgaagcttatagggatattccaaaaatcaca
gagctcagagagaaatttaagaacatcaagcaaatacttaaatcacatgtgttctctgat
ttctcgagcttaggtactgggaaagaaacagaagaaactaatttacttcagcacttgtct
gatgcttgtttagttgtggatgctttagagccatctgttagagaagagttggtgaataac
ttttgtagcagagagcttacatcttatgaacaaatctttgaaggagctgaacttgcgaag
ctggataaaacagaacgaaggtatgcatggatcaaacggcgaataagaacaaatgaagag
atttggaaaatatttcctctaccgtggcatgttccatatcgactttgtattcagttctgt
aagaagacaaggaaacaactggaggagatccttaataatatgaaggagaagccagatgtt
ggaacattattgttggctttgcagcgaactctagaatttgaagatgaattggcagaaaag
tttggggggggagctcaaggcaaagagacagggaatgatattgaagaaatcggtagaggg
gaaactggtcaaaatgtttcagatattcgtaagaagtatgaaaaaaagcttgctgcgcac
caggaaaatggttctgaggaaaagaaaggaaacaaagagttgtcggcacctggagctggg
ttcaacttccgtggaattgtttcatcttgttttgaacctcacttgacagtatacatagaa
ctagaagagaagacactaatggagaatttagagaagcttgttcaggaagaaacatgggat
attgaagagggaagtcaaaataatgttctatcaagcagcatgcagttgttccttataatc
aagaggagtttgaagagatgcagcgctttaacaaagaaccagacattgtttaatttgttc
aaggttttccaaagaattcttaaagcgtatgctacgaagctttttgcaagactacccaag
ggtggcacaggaattgttgcagctgctacgggtatggatggtcagataaagacatcggat
cgagatgaaagagtgatttgttatattgtcaactcagctgaatactgtcataagacggct
ggtgagctggctgaaagcatttccaaaataattgaacctaattttgctgacacggtggat
atgtcagaagttcaggatgagttttctgcagttataaccaaatcattagtaactctagtg
catggcctggaaactaaatttgatgctgaaatggctgcgatgactcgtgttccatgggct
acacttgaaaatgttggagaccaatcagaatacgttaatggcatcaatatgattcttact
agtagcattccagttcttggtggcctcctttcacctctatacttccagttcttccttgat
aagcttgcatcatcacttggtccacgcttctatgcaaacattttcaaatgcaagcagata
tcagaaactggagcccaacaaatgttattggatactcaagctgtgaagacaattctttta
gaaatacctacccttggtcgacagacatcaggtgcggctagctattcaaagtttgtaagc
cgtgagatgagtaaagctgaagcactgttgaaggtcatactgtcccccattgattctgtt
gctgatacgtatcgggcattgttaccagagggaacacctatggaatttcagcggattcta
gagctcaagggtcttaagaaagccgatcagcaaactatcttggatgacttcaacaaacat
gggcctgggattacacagccttctatcacaccacaaatggttgctgttgcccaaccagcc
ccaagtcatgctattgcttcattaatgcccagttctgcttcgattggacttattgcttcc
cgagaggatgtgcttacacgtgcagccgcgcttggaagaggtgctgccacaacaggtttc
aagaggttccttgctctcactgaagctgcaaaagacaggaaggatgggccttttagaaag
ctcttcaacccataa
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