Cannabis sativa (hemp): 115699260
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Entry
115699260 CDS
T08987
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115699260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115699260
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115699260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
115699260
NCBI-ProteinID:
XP_030482438
LinkDB
All DBs
Position
9:44762880..44778625
Genome browser
AA seq
983 aa
AA seq
DB search
MRTRKKSSSGTDTSTKPIRDSESRSSSEFLNDNGTLAEKSQEAVGKLLRRSNKRGSRGTK
KNDNNLQQCDLSSRQGSGSEKDDKQDIDSRVKLTVSEADGCSRDTTGSTLREDKVEETLP
CNLSESRADIDDLDWEDGSIPSLDPASNEVTIEFNETPDSVRRKPIRRVTAEDKEIAEIV
HKVHLLCLLGRGRLIDRACDDSLIQAALLSLLPRHLLNISMVAKLTAKDLHPLILWFRDN
FHVRSLTDVKMSFHSALAHALETCEGTSEEIAALSVALFRALNLTTRFVSILDVTSLKPD
GEKSDYFSQDASRSCRGIFSNSTPMVARQSEVSASLGKSFSPSQSVYETSQRSSCTTKDC
HLTDNTQHTDFPTNYDLKTKHVSGDCSLAFESKHDSSEACLAQKSQGSKRKGDLEFELQM
EMALSSTAVGNAGTKIPSVVNNSGNSLSAFSSHSKRMKKIVCEESCSNVISTAIGSKRVG
SPLYWAEVHCNGENLTGKWVHVDAINAIIDGEQKVEAVAAACKTSLRYAVAFAGNGAKDV
TRRYCMQWYKIASKRVNSIWWDAVLAPLRDIESRATGGMVLSENDHVDSSFNPNDSMRVS
ENLKDENLPNNPVLLGKSGLEVLKDFGERTGVKSSLRNSLIATRSSLEDMELETRALTEP
LPTNQQAYKNHHLYAIEKWLNKYQVLHPKGPILGYCSGHPVYPRACVQTLKTKERWLREA
LQVKVNELPVKESKYSRKLQKVKSFEDDDCARNNSEGTLELYGKWQLEPLQLPHAVNGLV
PKNERGQVDVWSEKCLPPGTVHLRLPRVFSIAKELEIDYAPAMVGFEFRNGQSYPVFDGI
VVCAEFRDVILEAYRGEQERKEAEEKKRNEREAISHWYQLLSSIVTRKRIKDRYGKSLSS
QASTDIKTASNISNVHVSADQAVNQSFRCQEGDMDTNKLGTTSTDLPEEHQHVFLTEDQC
FDEENLVLTKRCHCGFSIEVEEL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccaggaagaaatcatcatcaggtacggacacttcaacaaaacctatacgtgat
tctgaaagcagaagctcttccgagtttcttaatgacaatggaactctggctgaaaaatca
caggaggctgttggcaaacttctgagacgttccaataaacgtggctctaggggaacaaag
aaaaatgacaataatctgcagcaatgtgacttaagtagcaggcaaggaagtgggtccgaa
aaggatgacaaacaagacatagattcgagggtcaaattaactgtttcggaggctgatggt
tgtagtagagatacaactggcagcactttaagggaagataaagttgaggaaactttacca
tgcaatctttcagaaagcagggcagacatagatgatttagattgggaagatggatcaatt
ccatcattagatcctgcaagtaatgaggtgacaattgaattcaatgagacaccagattct
gtgaggcggaaacctattcgcagagttactgcagaagataaggaaattgcggagattgtt
cacaaggtccatttactttgcttacttggacggggaagattaattgacagagcttgtgat
gattctcttattcaggccgctttactttctcttcttcctagacacttgctgaatatatca
atggttgcaaaattaactgcgaaggatttgcatcctcttatcctttggtttcgagataac
tttcatgttagaagtttaactgatgtgaaaatgtcatttcattcggctttggcacatgct
cttgaaacttgcgaagggacttcagaagagattgctgcgttgtctgtggcactgtttaga
gctttgaatcttacaaccaggtttgtgtccattttggatgtcacctccttaaaaccagat
ggagaaaagtctgattattttagtcaagatgcaagcagatcatgtaggggcatcttcagt
aattcaactccaatggttgcgagacaaagtgaggtgtctgcttctctgggcaaatcattt
tcacccagtcagagtgtgtatgaaacttctcagaggagttcatgcacgactaaggactgc
cacttaacagacaacactcaacacacagattttcccactaattatgatttgaagactaaa
catgtctcaggagattgttcattagcttttgagtcgaagcatgattcctctgaggcctgt
cttgcccaaaaatctcaaggatcaaagagaaaaggggatcttgagttcgagttgcagatg
gaaatggctctttcttccacagcagttggaaatgcaggcactaaaataccatcagttgtg
aacaattcaggcaatagtttgtctgctttctcttcacattcgaagagaatgaaaaagatt
gtatgtgaagaatcatgttccaatgtaatatccactgcaattggatcgaaaagagtaggg
tctcctctgtattgggcagaggtacactgcaatggagagaacttgactggaaagtgggtg
catgtcgatgctattaatgctattattgatggagagcagaaggttgaagctgtagctgcg
gcatgcaaaacatctttgagatatgcagttgcctttgcagggaatggtgctaaagatgtg
acacgaaggtattgtatgcagtggtacaaaatagcatcaaaacgtgttaactcaatttgg
tgggatgcagtccttgcaccattgagagatatcgagtcaagagcaaccggtggtatggtc
ctttcggaaaatgaccatgtagattcctcattcaatcctaatgattcaatgagagtttca
gaaaatctgaaagatgaaaacttacctaacaatcctgtcttgcttgggaagtctggcctt
gaagtcttaaaagattttggtgagaggactggtgtgaaatcttctttgagaaattctttg
atagctacaagaagctctcttgaggatatggaattggaaacaagagctttgactgagcca
cttcctacaaatcaacaggcatacaaaaatcaccatctatatgccattgaaaaatggctt
aacaagtatcaggtacttcatccaaagggtcccattctcggttattgttctggtcatcca
gtctatcctcgagcatgtgttcaaactctcaaaacaaaagaaagatggctgcgagaggca
ttgcaagtcaaagtcaatgagctccctgtaaaggaatcgaaatattctaggaagcttcaa
aaagtaaaatcttttgaagacgatgattgtgccaggaataactctgaaggaacactcgaa
ctgtatgggaaatggcaactggaaccattacagctgccacatgctgttaatggattagta
ccaaagaatgaacgcggtcaagtggacgtgtggtctgagaagtgtcttccaccaggaact
gtgcatttaaggttgccaagagtattttccattgccaaggagctggaaattgattatgca
cctgccatggttggctttgaattcagaaatggtcaatcttatcctgtctttgatggtatt
gtagtttgtgccgagttcagggatgtgatactagaggcatacaggggagaacaagaaaga
aaagaggctgaagaaaagaaaaggaatgaaagggaggctatatctcactggtatcagctt
ctttcgtccattgttacccggaaaaggattaaggaccgttatgggaaaagtttgtcgtca
caagcatctacagacatcaaaaccgcaagtaatatctcaaatgtgcatgtcagtgcagat
caggctgttaaccagtcttttagatgccaggaaggagacatggacacaaacaaattaggt
actacatccactgatttgccagaagaacaccaacatgtattcttaacagaggaccaatgt
tttgatgaggagaacttggtacttactaaacgatgccattgtggattttcaattgaagta
gaggaattataa
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